result

Gene information

Detail information of AfisC8G05424

Location

Gene	Chr	Start	End	Strand
AfisC8G05424	chr8	999158311	999159839	+

Sequences

CDS

Protein

Gene

>AfisC8G05424
ATAAATCAATAAATTAAATATAAAAAATTCAGATGAATTATTTAATGAGTCCTGCTGATATTGAGGTTGTAACATCTGATGGATGTAGAATTGCTGTTCATTCTCGAGTTCTTGTAAGTTGAATTTTTTTCCTTTTATTTTTTCCATTTTCATGACTTTTTAATTATATATTATGACCTTATTTACATTTAAATTTCAGGCTTCTGCCTCTTCTACGTTGGAAAACTTGGTGTACAGCTCATTAAACCTATACAGATCTGATCATAAGGCAGTCATAAAAATTTCCTGCATGAAGCCTGATGTTGTTATTACATTTCTTCATTGCATATACTCACCCAGGTATGATAACATTTCTCACAATTGCTATAAATATACATAAACTATAAATATATATAAACTAAATACGCATTGTAATTATAGGAGTGCATTGTCAATGATAGAAGGAATAGAATTGCAACTGTTTGTACTAGCACACAAGTACAAAATAAGGTGGTTGAAAGAAACTTGTGAGAAAGAAATCATGAAGAAACATAATGCACATATGGTAGTAGATGTATTGCATATATCAAAAATATGCAATGCTTCAAGACTAAAAGTCAAATGCATGAACTTCATTTCTAAAAGCTTCGAGTTGGTTCAGAAGTCTGATGGCTGGAGATTTGTTCAGAAGAATGATCCAAGACTAGAACATGAAATACTGCAATTCATGCATGATACAGATCAGGTGCCTATACAATATAAATATATATTCATGCTGATATTGATAAGCATATATCAAAGTAATTGAAACTAATATGGAAATGATGGTTTAAAATATACAGAGGAAGAAGAGATGGAGGAAGTGTAAAGCAGAGCAGGAGATGTATGGGCAGCTAAGCGAAGCGATGGATTGTCTGAACCATATATGTGCAGAAGGATGCAGCCATGTAGGACCTTGTGTGGAGTTTCAAACATGTGAAGGGCTAAGGCTTTCGATAAGGCATTTTGTAGCATGCAAAGCGAAGGTCTCTTCAAAGGGCATTTGCTCACATTGTTATAGGATGGGGCAGCTCTTTAGGCTTCACTCGTCCTTGTGTGATCTGGGTGGGTCTTGTAGGGTGCCACTTTGCAAGTGAGTATATTTGTTTTCTTTCTAGTTTTTTTTTCTTTAAATATATATGTACACACACACGTAAGTATGTATGTATGCATATGTAATGGGGATTGAAGATATATATGTTGTTGCAGGCAATTTAAAGCAAAGGGGCAGATGGAAAAGAAAGGAGATGATGGAACATGGAGATTGTTAGTGAAGAAGGTTAATGTTGCTAGAGTTATGTTCTCTTTTACCAGGAGGGAAAGACCAAAGCAGCTAGATATCGTATAGATGAATTTGATGAAACTGATTTTTGCAGTTCGTTTATTTTCTTCTTGTGATTGATTCATTTAAATTTTTTTGTTAATTGTTGTAGATTTGCCTTTTGGTTTAGGCTTGCATTCTTTTTACAGTACTGTGAATATTGATCTGAAGTAAAGGATGTACATTTACA

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020246854.1	7.3e-89	LOW QUALITY PROTEIN: BTB/POZ and TAZ domain-containing protein 2-like
Swissprot	Q94BN0.1	1.2e-64	BTB and TAZ domain protein 2
trEMBL	A0A804HMS2	2.7e-77	(wild Malaysian banana) hypothetical protein

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT3G48360.1	41.74	2e-66	249	ATBT2;BT2	BTB and TAZ domain protein 2

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC8G05424	AT3G48360.1	333	172	5	1	312	26	357	41.74	2e-66	249
AfisC8G05424	AT5G63160.1	319	167	3	1	302	18	335	42.01	2e-66	249
AfisC8G05424	AT1G05690.1	307	179	5	6	300	52	350	35.18	2e-42	169

Ortholog group

Species	Genes
-	-

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00651.28	BTB	Domain	8	109	39.5	4.7e-10
PF02135.13	zf-TAZ	Family	194	271	34.5	1.9e-08

Gene Ontology

Accession	Ontology	Name
GO:0005516	F	calmodulin binding
GO:0005634	C	nucleus
GO:0005737	C	cytoplasm
GO:0006508	P	proteolysis
GO:0007623	P	circadian rhythm
GO:0009409	P	response to cold
GO:0009553	P	embryo sac development
GO:0009555	P	pollen development
GO:0009611	P	response to wounding
GO:0009651	P	response to salt stress
GO:0009734	P	auxin-activated signaling pathway
GO:0009738	P	abscisic acid-activated signaling pathway
GO:0009751	P	response to salicylic acid
GO:0009753	P	response to jasmonic acid
GO:0010167	P	response to nitrate
GO:0010182	P	sugar mediated signaling pathway
GO:0042542	P	response to hydrogen peroxide
GO:0044267	P	cellular protein metabolic process
GO:0051973	P	positive regulation of telomerase activity

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network