result

Gene information

Detail information of AfisC8G05951

Location

Gene	Chr	Start	End	Strand
AfisC8G05951	chr8	1095561894	1095567742	-

Sequences

CDS

Protein

Gene

>AfisC8G05951
ATGAAATGTACACTGTCTTCATTATCTTCAGATTTACTTTCAGTTTCTTCTAAAGTACATTCTATTGTTACAGCTTCAATTGCAGGGATCTTAAACTTTGATGATGAGGCTACAATCCTGGAAGCAGTACATGGTTCACTTTGTGGTAAAGTACTTTCTGATGCTACACCTTCAGTTGTAGAGATCTTAGACGTTGATGAAAAGGCTGCAAGCCCGAAAGCAGTGCAGGATGCATTAGAGTCTGTAGTCATGTGTAATTGGGGTTCTACTTGCTGTTGTAAAATGGAAAATGTATTATGAAGGGGGACAGTTGAAATGGATTCACTAGTACAAAAAGTGCATATTGCTTCGCCTCATTTGCATCAGTTGAAGTAAAAACTGATGCAAATAGAACTATTTGCATCAGTTCTATCTTAATAACCGATGCAATTGGTACGTGGAAAACAATAGCTAATAAAAAATCAAATTTGCATCAGTTGTCACCAACAACCGATGCAATTGGGACGTGCAAATAGTTTTAGTCGCATCGGTTTTAAATTCAACCGATGCAACTACGGTAAATTTTGTTTGCCGCCGAATCATTTTTCTTTGCCGCTAAAATTTTTGTTCTTAAATTTTCGTTCCTCCATCAAATTTTCATTCCGTCCCCAAATAATTTTACAGCCCCCCTTAAACCAGATCTCCTTTTAATCTCCACCTTCAGTATTAATTCCAATCTCAAATAAAATACAGGCAATAAGCCTTGCGTACGTCGTCAGCGGCTATTGTGAGGAGGCGTGTTTCAAGCATGTTAGGGCAAGGCGAGGTCGAACGACATCAACATCTTAAGGCGATAAGGAAGGTCGCATGCGCTTCGAGGTACGTTCTAGTGATGCGAGTTATGGAGGTGTGAATCTAGGTGCGATGGAGGTGCTCAACAGCGATGGCAGGTGGCATACTTCTTTTTGTCATTAAAATTATCATTAATTTCTAGGGCAAGTGAAGTCTTCCACTTTCGTCATTTAAATTTTCTTGCATTGAAAACTCATTAAATGTTTGTGAATATTGGACGCCTTTATGCTTACATGTCTCAGTTTGCCAGTGAAAATGATGCATTAATCAATTCTGCATGCACCATCTCTCTGCTCTCATTAAACGAGAAGAGTTACCAAATATCATGCGTTACTTCAAAAGTTCAAACCATGCGCTCTTAGTCTCATTTATGATTTATTAAATTCTTTGTTCGAAACCACCATTATTAATGTGATCCAATTAGACAGATTTTATATGTCATATTTCATTTTATGTGCCATTTAATTTTAAGAATTTTAAATCATTAAATTTCATTACATGCATATTTACCTATGTTGATATTTGAATATTGGGACTGCTATCTAACCATCAAATTTAACATCATAAAAGCAAATTTATTTGTGATTATTGTGCCATTTATATTGCAAGGATTAGATGCTTACTATTTATTTGGAAGTTGATTTTTTATTGATCTTTGCTGATAGTCCAAGTGGCTCTGTTTTTCTATAGCACTTTAACCTTATCAAGTTCTTGGCTATGCTTAGTATACCTTTTCTGTTCCTTTTTGTTAAGTGTAGAAAACAAAGTTTCCGTCATAAACCTTAAGAACTGTATTATGTACCATGTATGCATCTGTCGTTCTTGTTTACAGTGATATTAGACAATAACTAATATGGTTATGGTTAGCATATGCTTTTGATTATGGTTATGCGAATTGTTTATTATTTAGAGTTCATTTCTTATTGTTGTCTCGTTTGTCCCTTGTATTGCTGTTAAAATTAATTTTAACCCACCTCTATTTTCCATAGCACATAATAGCCTGATTAGACTTTACTAGGAGCTGCACGGTTCAAACACTCAGTTGTCTCATTTGTCAGGTGACAGAGTTTAGACAACAACTCAAACGTGAGGGAATAATCTTGTTTGGCTTTTCTCTTGCAGTCTGCAAAAAGAACTAAGCCTTTCTTAGTTGTAGTAGTCAAAGCCATAAACCTTGTAATGCTTACCACAATTTGCATTTATTGCCATAGAATGTTCCATGCGATTGTTTCCTGCATTTATAGTGAGACAAATTTAGGCTTAGGGACAACAATTAGATGCATGTAAACTTATGTAATTGTATGTGACAGATTAATGAATGGTTCATGTTGCAGCTAGGAATTATATTTTGCATAATTAGTCTAGTAACAATCAGAGACTGGGTTTAATTTTCTTATATATGTATACATCACATGCTTGCTACCATGAGCTACAATTTTGCAGAAAATGTATGATTGTTGTATTTATATGCTACAGTGTCCAATAAATGTGATTTGGCCCAAGTTATCTCTTTGTATACGAAACTGGGCCGCACCTTTGTTGAGTTTCAATGAATAAAAGTAGTATTTTTTTTTGCTCTCAAGGATTTTAATCGACTTTGAATGCTAGATCATCATCTATTTACTTCTATTATAGTACATTTATACACACATAACCTATGTGTGTGTGTTCTTATTCAGGGGAGATGCAGGCACTATGATGGGCAGTAGATGCAAGTCAGTGAAGTTAAATGGTATGACTATTCCTGATTCACGTTTGAGTTGTTGTCCTAATTCACTGTGATGGGCAGTAGGTGCCATTCACGTTGAAGTTAAATGGTTTGAGTTGTCGTGAGCTTCAGAGCATTATACTGAGTGAATAGGTTACTATTCCTGAGCATAATTATATGACTATTTTTTGAAGCATTTTGAAATGTAAGTCTCTAAACGTGCTTCTTTTAGGGGCCATTTGTTAATGGTGAGAACATACCTGCAGTAGACTGAAAATTATCGCTAAATTGCTTCTTTCCATTTTTAGTAAATTATCTCTAAATTACCAGTAGTGCATGTATTTTCAAATGAAGTTACTTAGAAGTTATAATGGATGCTTCAAATTAATTTCTTAGCAAACCTTACTGATCTTGTCACTTGTATGAGTTTTACCTTGTGAATTATTGCATTTAGACATTCTAATTATTTTGTATCATATATCAACTTTTAGCAGTATGCTATCTTATAACAGTTATTTGCAATGCCTGAAATAGAATTAGGCTTACCTCCATAATATATATATGTGCTTCATATTTTCTATTAAGGATCCCTGGACATTAAGGTATACATGATATACTGTCATCAGCACATTATCATGTTTATATCCTGACTAATTACAACATTCATCTTCAGTCACCAGCATGTACAAATTATTGTTTATGTGCATAATACATTTATAATGAATAGTAAAGAGTATGTTGGTTTAACTAATCAAAGACTGAATGGCTTCGAAATGCTTACTTGTGGCCTTGCAACTCACTTTGTTACTTCAGAGGTATATACACTTATTATATAACTGTTCTGAAGTTATATAAATTTATCATAGGCCGTGTTAATTCATATAAATTGGATATGTTGGAGGAATCTCTCGTTGGAAAAAACACTTCTGATTCTTCTATTGTTCATGGAATTATCAATCGATTTTCTCATAAATTGCCTTTAGAGAAAATGGTGATATTAACATTTGAGCCACCAGTCTTTGACATGTTAAATTAGCTAGTGTTGATAGTTGCATTTCCACAATCTATGTATTAAAATTTAGGCATGAAATATGAGAACCATAAATGTTACATGCAATAAGTTCTAGTGTAAATGTGAGGTATCCAAAATGGATGGATAATGAATAATGAGATGTCTCAGAAAAATAGTAATGTGGTTGTGCTAACCTTTTAAATTTATTTTATAGGTTGACAGCCAATGCAACCAAAATCTAAACCAAATACAGATCACAATGTTTAAATACCAAGGAAAAATCAACCAAAGAATTCCTCAAATGAATGCGCGATTCAACACTCAGAAAATCTCTATCTTCTACCGAAATCTAAGAAATATAATTGCTAGTCATATCTTATCAACCAATGAGCATTATGTTCAGGAATCTGCTATGGAAAAAGAAAGAAGCTTTGAAACATCATTTGTACAAAAACATTGGGCCCTTCAGCAGCTTAAGAGAAACGAGCATCAGTCCTGGAGACCCCAAAGAGGCTTTCCAGAAAAATCTGTTTCTGTATTAAAGGCTTGGATGTTCCAGAACTTTCTACATCCGTGAGTTCAACTAAAACTAAAATCACAGTCGTTTCTTGAACACTCCAAAATTCCAGACTATTAACATAGGAAGTTATCACTGTTGAGAAATCACAGTAGTTTTTAAAGGTTTTAGTTTTTAACTACAGTAGAAACACATAGTCAAACGTGTTTTTGTTAGTCTAATGCTGAATTTAGTGACCAACTGTAGAAAGTAACAGGTGTTTGGACTAATAAAGAATTTATTTATTTTTTCAATTCAAGTATCCAAAAGACAGCGAGAAGCATATTCTTGCCATACAAAGTGGTTTAACACGGAGTCAGGTAGTCATTTTTGGAACTCCATTTATATACATTTTTCGTTTTTTTTCCGAACATACAAATAATATGTGCTATGTACTACTCTTTTTATATGTTACACTTAGGTAATACTAATTTCTTAGATTGTGAATATGGGATAACATGGTATAGGTATCTAACTGGTTCATAAATGCTCGTGTTCGCCTATGGAAGCCTATGATAGAAGAAATGTATGCAGAAATTCATAAAAGAAATCAAGCAGAAGAAGGAACTGCTGGTTAAGGAAGAAATCTTGCATATACTGGAGGTTAGAAAACCCGAATGAACTAAAGCTTTCAGCCTCGTGGAGCATTTTGTGAGCATTGTATCAGCTCTTGTTGTACATGAAGCAGTAGTGTGCAATAGTGCATAAGTTGCAGAGTTAGCAATTATATTTTGTTTTACTTCATTAAGCATGCTTATATCGTTAACTCCAAATTTCAAGTACAGTAATATATTATCCGTTGAATAGTAGAATGGCATGTCTGCACTTATCAATCTATAATGTTGTATTGCAGTTCGAACTGCTGTAATATATCTTATACCAGGATTTGGCGGTGGCATCCTCTCAAGTCTCAACTCTATTTACCGGAAACAACATTTCGGTTGGTGCATCTTTTCTTATTGATGCTTTTATAGAGTAAGCATTTAATTTCCATTTTTTCCCCTAAAACAGAGAGGGTGGACTGGAAGGAAACGCCTCAAGCTCATGTCATCATATTGGATGTGCTAGGTACATTACAAATTTGCATTCAAACCATATACATTTATATATAACTGTGTTTGCACATGATCACAATATAACGGCTGTGATTTGTGAAATGATGGGAAACAGGGGTGGAGAAGAAAGATATAAAGATAGAGGTGGAGGACAACATATTGCTAAGAATAAGCGGGGAGAGGAAGACAGAAGAGGAGAAGGAAGGGGATACATGGTACAGAGCGGAGAGAACAGAGGGCAAGTTCTGGAGACAGTCTAGGATGCCTGCAACTGCGAATTTGGAGGTGATAAAAGCACATTTGGAGAACGGGGTGTCGAAATTGTTCCAGTGGTATAAGTAGTGACAGGAAGTTGTATGAGCAGTAACAGGGATTGGTGGAGCAGATGTTGGTGATTGAGGAGAGTTATATAAGTGGGGTTGTTGGAAATGTGACTATATGCTGAATGGAAAATTGTTGTTGCTGTCAGGTGGAAGAATGCAGCAGGCATTGAAGGTGATAGTGTAGAAGAGGAGCAGGTTGTGGTTGTTTTGGATGGAACAGCTCAACTTCAGGTAGCTCATGTACAATATAGGATGAAAGTTTGTGCATTTGAAGACCAATATCGGCTTAATTTATCCATTGTCAATGATACATTCTCTTCTTGGTATATTATTTATGTTTTTCATTCTATTGTAGAATTATTAA

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020249125.1	1.9e-56	homeobox protein ATH1-like
Swissprot	P48731.1	4.8e-44	Homeobox protein ATH1
trEMBL	A0A5P1FQV2	1.4e-56	Homeobox domain-containing protein

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT4G32980.1	54.01	3e-48	189	ATH1	homeobox gene 1

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC8G05951	AT4G32980.1	187	68	5	176	360	275	445	54.01	3e-48	189
AfisC8G05951	AT2G35940.3	136	45	5	223	348	320	446	52.94	4e-30	129
AfisC8G05951	AT2G35940.2	136	45	5	223	348	320	446	52.94	4e-30	129

Ortholog group

Species	Genes
-	-

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF05920.8	Homeobox_KN	Family	313	344	33.5	2.7e-08
PF00011.18	HSP20	Family	372	454	62.2	3.8e-17

Gene Ontology

Accession	Ontology	Name
GO:0005215	F	transporter activity
GO:0005634	C	nucleus
GO:0005788	C	endoplasmic reticulum lumen
GO:0006810	P	transport
GO:0008285	P	negative regulation of cell proliferation
GO:0009408	P	response to heat
GO:0009507	C	chloroplast
GO:0009610	P	response to symbiotic fungus
GO:0009640	P	photomorphogenesis
GO:0009737	P	response to abscisic acid
GO:0010076	P	maintenance of floral meristem identity
GO:0010077	P	maintenance of inflorescence meristem identity
GO:0010197	P	polar nucleus fusion
GO:0010201	P	response to continuous far red light stimulus by the high-irradiance response system
GO:0010223	P	secondary shoot formation
GO:0010227	P	floral organ abscission
GO:0010228	P	vegetative to reproductive phase transition of meristem
GO:0010229	P	inflorescence development
GO:0010371	P	regulation of gibberellin biosynthetic process
GO:0044212	F	transcription regulatory region DNA binding
GO:0042803	F	protein homodimerization activity
GO:0043565	F	sequence-specific DNA binding
GO:0046982	F	protein heterodimerization activity
GO:0048510	P	regulation of timing of transition from vegetative to reproductive phase
GO:0080006	P	internode patterning
GO:0090470	P	shoot organ boundary specification

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K13993	HSP20; HSP20 family protein	EC:-	Protein processing in endoplasmic reticulum	ko04141

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network