Detail information of Asa1G00221


Location
GeneChrStartEndStrand
Asa1G00221chr14964802249649080+



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_020673850.11.1e-78transcription factor MYB61
SwissprotQ8VZQ2.12.8e-68Myb-related protein 61
trEMBLA0A2I0WQV67.7e-79Transcription factor MYB86

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT4G01680.180.392e-72 269AtMYB55;MYB55myb domain protein 55

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag116409.t1; g168143.t1
Allium fistulosumAfisC1G04864; AfisC1G07960; AfisC8G00861; AfisC8G05668
Allium sativumAsa0G04121.1; Asa1G00221.1; Asa8G00927.1
Arabidopsis thalianaAT1G09540.1; AT1G57560.1; AT4G01680.1; AT4G01680.2; AT4G01680.3
Oryza sativaLOC_Os01g18240.1; LOC_Os01g50720.1; LOC_Os05g04820.1

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF00249.28Myb_DNA-bindingDomain146155.93.1e-15
PF00249.28Myb_DNA-bindingDomain6710948.66.2e-13

Gene Ontology
AccessionOntologyName
GO:0003682Fchromatin binding

KEGG pathway
KONameEnzyme IDPathwayPathway ID
K09422MYBP; transcription factor MYB, plantEC:- --

Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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