result

Gene information

Detail information of Asa2G00856

Location

Gene	Chr	Start	End	Strand
Asa2G00856	chr2	252405515	252406738	+

Sequences

CDS

>Asa2G00856.1
ATGGGGACTTGCTATATAAAAAAGCTCCCGCTGGCTAATGGAATATCAGCACAAAGTTTGAGTACAGTGACTTACATCAAGTATAACACATTGAACGCAAATAATAATGGGTCAAGTAACTGGAACAATAACCCAAATCGTGATGGGTCGGGTAACTGGAAGAGGTGGGTACTAATATTATCATACATTCTATTTGGTTCTGTAGTACTAATTGGAGCTTGTTGCTGTATGTATCTTAAAAGAAAACTTAAAAATGTTAGGCTAAAGATAAACAGTATTCTCTCAGGTTCAGCAGCATGTTCTTTTACATTCAAAGAGCTGGAACAAGCTACCAAAAGATTCAGCAAAGGACTTGGTAAAGGCGCTTTTGGGGTAGTCTATAAAGGAGTCATGCCGTCACAGTCTAATGATAATAATGCAGTAGTAGCAGCAGTCAAAAAATTAGAAGAAAGCATGCTTGAAGAAGGGGATCATGATTTTGAAAATGAAATTGCTACTATTGGCCAAACACATCATAAAAATTTAGTACAGCTCATTGGATATTGTGAGGAAGGGTCGCATAGACTTATAGTGTTCGAGTTCCTTAGTAAAGGATCACTTAACAAGTACATCTTTGGAAGCAATCGACCAAAGTGGAATCAAAGAGTACGAATTGCTCTAGGTATTGCAAATGGACTGGCATACTTACACGAACAATGCAGGAACCAGATTATACATTGTGATATAAAGCCTCAAAATATACTTCTAGACGAGAATATGGAAGCTAGAATCTCAGACTTCGGGTTGGCAAAATTGTTAAGATTTGATCAAACACGAACGGCCACAGGCATTAGAGGAACTATAGGTTACTTTGCACCAGAATGGTTCAAGAATGTTGGAATCAGTACAAAAGTAAATGTTTATAGCTTTGGAGTGATGTTACTGCAAATAATTTGCTGTAAAAAGAGATTCGAGTGGGGATTAGAGAGCCATGAAAGAATGACTGTTGTGGACTGGGCTAAGAATTGTTTAGCAAATGAAAGGTTAGATTTGTTAGTTGAGGATGATGAAGAAGCAATGAGTGACGCGATTACGTTAGAAAGGTTTACGATGGTTGGTATTTCCTGTGTTGAAGACGAGCCATGGTTAAGACCCACGATAAGCAGGTTGTGCATATACTTGAACAAACAACTGAGTCCTCTATCCATTAGAAGATCTCTAAGGCTTGTAACAATGTACTGTTAA

Protein

Gene

>Asa2G00856.1
ATGGGGACTTGCTATATAAAAAAGCTCCCGCTGGCTAATGGAATATCAGCACAAAGTTTGAGTACAGTGACTTACATCAAGTATAACACATTGAACGCAAATAATAATGGGTCAAGTAACTGGAACAATAACCCAAATCGTGATGGGTCGGGTAACTGGAAGAGGTGGGTACTAATATTATCATACATTCTATTTGGTTCTGTAGTACTAATTGGAGCTTGTTGCTGTATGTATCTTAAAAGAAAACTTAAAAATGTTAGGCTAAAGATAAACAGTATTCTCTCAGGTTCAGCAGCATGTTCTTTTACATTCAAAGAGCTGGAACAAGCTACCAAAAGATTCAGCAAAGGACTTGGTAAAGGCGCTTTTGGGGTAGTCTATAAAGGAGTCATGCCGTCACAGTCTAATGATAATAATGCAGTAGTAGCAGCAGTCAAAAAATTAGAAGAAAGCATGCTTGAAGAAGGggatcatgattttgaaaatgaaattgctACTATTGGCCAAACACATCATAAAAATTTAGTACAGCTCATTGGATATTGTGAGGAAGGGTCGCATAGACTTATAGTGTTCGAGTTCCTTAGTAAAGGATCACTTAACAAGTACATCTTTGGAAGCAATCGACCAAAGTGGAATCAAAGAGTACGAATTGCTCTAGGTATTGCAAATGGACTGGCATACTTACACGAACAATGCAGGAACCAGATTATACATTGTGATATAAAGCCTCAAAATATACTTCTAGACGAGAATATGGAAGCTAGAATCTCAGACTTCGGGTTGGCAAAATTGTTAAGATTTGATCAAACACGAACGGCCACAGGCATTAGAGGAACTATAGGTTACTTTGCACCAGAATGGTTCAAGAATGTTGGAATCAGTACAAAAGTAAATGTTTATAGCTTTGGAGTGATGTTACTGCAAATAATTTGCTGTAAAAAGAGATTCGAGTGGGGATTAGAGAGCCATGAAAGAATGACTGTTGTGGACTGGGCTAAGAATTGTTTAGCAAATGAAAGGTTAGATTTGTTAGTTGAGGATGATGAAGAAGCAATGAGTGACGCGATTACGTTAGAAAGGTTTACGATGGTTGGTATTTCCTGTGTTGAAGACGAGCCATGGTTAAGACCCACGATAAGCAGGTTGTGCATATACTTGAACAAACAACTGAGTCCTCTATCCATTAGAAGATCTCTAAGGCTTGTAACAATGTACtgttaa

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020241834.1	1.1e-118	G-type lectin S-receptor-like serine/threonine-protein kinase LECRK2 isoform X1
Swissprot	Q7FAZ3.1	4.7e-93	OsRLCK134
trEMBL	A0A5P1FSN2	1.1e-118	Receptor-like serine/threonine-protein kinase

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT5G60900.1	51.61	4e-82	301	RLK1	receptor-like protein kinase 1

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
Asa2G00856	AT5G60900.1	279	128	3	102	380	437	708	51.61	4e-82	301
Asa2G00856	AT1G34300.1	344	177	10	56	383	423	752	39.83	3e-66	249
Asa2G00856	AT5G24080.1	320	180	4	68	383	84	395	40.00	3e-64	242

Ortholog group

Species	Genes
Allium cepa	g126559.t1; g210181.t1; g375190.t1; g520617.t1; g520618.t1; g520640.t1; g520641.t1
Allium fistulosum	AfisC1G06789; AfisC3G01252; AfisC3G01258; AfisC3G01260; AfisC3G01267; AfisC3G01268; AfisC3G01277; AfisC3G01279; AfisC3G01283
Allium sativum	Asa2G00855.1; Asa2G00856.1; Asa2G00860.1; Asa2G00862.1; Asa2G00865.1; Asa2G00867.1; Asa2G00869.1; Asa2G00870.1; Asa2G00876.1; Asa2G00882.1; Asa2G00883.1; Asa2G00885.1; Asa2G00888.1; Asa2G00889.1; Asa2G00892.1; Asa2G00902.1; Asa2G00903.1; Asa2G00904.1; Asa2G00905.1; Asa2G05713.1
Arabidopsis thaliana	AT5G60900.1
Oryza sativa	LOC_Os01g73370.1; LOC_Os04g12540.1; LOC_Os04g12560.1; LOC_Os04g12580.1; LOC_Os04g12600.1; LOC_Os04g39910.1; LOC_Os04g39930.1; LOC_Os06g41510.1

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF07714.14	Pkinase_Tyr	Domain	114	383	157.2	4.3e-46

Gene Ontology

Accession	Ontology	Name
GO:0004672	F	protein kinase activity
GO:0004713	F	protein tyrosine kinase activity
GO:0005524	F	ATP binding
GO:0006468	P	protein phosphorylation

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K04733	IRAK4; interleukin-1 receptor-associated kinase 4	EC:2.7.11.1	MAPK signaling pathway	ko04010
			NF-kappa B signaling pathway	ko04064
			Toll-like receptor signaling pathway	ko04620
			Toll and Imd signaling pathway	ko04624
			NOD-like receptor signaling pathway	ko04621
			Neurotrophin signaling pathway	ko04722

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network