result

Gene information

Detail information of Asa2G00860

Location

Gene	Chr	Start	End	Strand
Asa2G00860	chr2	253793651	253796093	-

Sequences

CDS

>Asa2G00860.1
ATGGCTTTCCGTTCATACATCTTACCCTTCCTGTTGCTGCTTCAGCTCTTTCTACTCAAATCTACATGTCAAAATCTAACTCTGGGTACCATTTTATCTCCATCCACTAACAGTTCACCTCTGCTCTCCCCCTCCGGGGATTTTGCTTTCGGCTTCCGTGCACTTGATACTGATCCTTCGCTCTTTCTTCTTGCTGTTTACTACAACAAAATCAAGCCCAAAACTGTAATATGGACTGCAAACGGAGACAATCCTGTATCAGAGCAGTCCAAAGCCCAGCTTAATTCAGACGGGCAACTGACCTTACAAGACTCCTCAAATCAACAAATTTGGAGTTCAAATATGGATGGAGCAAGCTCTGGCTCCATGCGTGATGATGGAAATTTCATACTCTACTCTAGTACTTCTTCTATAGTATGGCAGACATTTGATTCTCCTACTGATACTATATTGCCTGGTCAAGTATTGAACCAAAATAGCGCTATGTTCTCAAAACTTACTGACGATGATTATTCAAAAGGGAGATTTAAGTTTATTATGCAGGGCGATGGAAATTTTGTTTTGTATATACTGGACTTTCCAACGCAAACTGATAATAAAGACCACGCCCTTTATTCTACACACACACAAGGTAATCCAGGAAAAACTAGCCTTGTGTTTAATCAGACTGGAAGTCTGTATGTGAAGATTACTGATGGCACTACAGCTGTAGTGTTCCCAGAACCTGTTCTAACTGGAGCCAACTATTTGAGAGCAACTTTGGACTTAGATGGTGGTTTCAGGCAGTATTCCTTTCCGGAGGCGCAGCTAAGCACTGGAAGTTGGAGAATTGCAGCAAATTTTGTTGAAGATCTATGCATGCTCTATGTTTATGTTGGAAGTGGGATATGTGGACCCAATAGTTACTGCACAAAATATGCCAGTGGACTAATCAATTGTCAGTGTGCTCCTCACTACTCTTTCATAGATCCAAACAGAAAATACAAAGGTTGCAAACCAGATTTCATTCCACAACCCTGCGGACAAGGCAGTGGGCCAACTTCCGCTTTTGAAATCGTTAAGCAAATGGATTGGCAATCATATGGAGCCAAAAAGCTTACTCCATTTAATGAAACTCAATGCCAAAATGAATGCTTGAATGATTGCTTTTGTTTGGCTGCTGTATACGACATGGGGACTTGCTATATAAAAGGGCTCCCGCTTGCTAATGGAGTATCAGCACAAAGTTTGAGTGCAGTGACATACATCAAGTATAACAAATTGAGCACAAGTAATAATGGGTCAAGTAACTGGAACGATAACCCAAATCGTGATGGGTCGGGTAACTGGAAGAGTTGGGTAATTATATTATTGTCGATTCTATTTGGTTCTGTAGTACTAATTGGAGCTTGTTGCTGCATGTATCTTAAAAGAAAACTTAAAAATGTTAGGCCAAAGACAGACAGTAATGTCTCAATTTCAGCAGCGTGCTCTTTCACATTCAAAGAGCTGGAACAAGCTACCAAAGAATTCAAAGATGAACTTGGTAAAGGCGGTTTTGGGGTAGTCTATAAAGGAGTCATGCCGTCACAGTCTAATGATAATAATACAGTTGTAGTAGCAGTCAAAAAATTAGAAGAAAGCCTGCTTGAAGAAGGGGATCATGATTTTGAAAATGAAATTGCTAGTATTGGCCAAACACACCATAAAAATTTAGTACAGCTCATTGGATATTGTAAAGAAGGGTCCCATAGACTTATAGTGTTTGAGTTCCTTAGTAAAGGATCACTTAACAAGTACATCTTTGGAAGCAATCGACCCAAGTGGAATCAAAGAGTACGAATTGCTTTAGGTATTGCAAACGGACTGGCATACTTGCACGAACAATGCAGGAACCAGATTATACATTGTGATATAAAGCCTCAAAATATACTTCTAGACGAGAATATGGAAGCTAGAATCTCAGATTTTGGGTTGGCAAAATTGTTAAGATTTGATCAAACACGGACAGCCACAGGCATTAGAGGAACTATAGGTTATTTTGCGCCAGAATGGTTCAGGAATGTTGGAATCAGTGCAAAGGTAGATGTTTATAGCTTTGGAGTGATGTTATTGCAAATAATTTGCTGTAAAAAGAGATTCGAGTGGGGATTAGAGAGTCATGAAAGAATGACAGTTGTGGACTGGGCGAAGAACTGTTTAGCAAATGAAAGGTTAGATTTGTTAGTTGAGGATGATGAAGAAGCAATGAGTGACGTGATTACGTTACAAAGGTTTACGATGGTTGGTATTTCCTGTGTTGAAGACGAGCCATGGTTAAGACCTACGATGAAGCAGGTTGTGCAAATGCTTGAACAAACAACTTAG

Protein

Gene

>Asa2G00860.1
ATGGCTTTCCGTTCATACATCTTACCCTTCCTGTTGCTGCTTCAGCTCTTTCTACTCAAATCTACATGTCAAAATCTAACTCTGGGTACCATTTTATCTCCATCCACTAACAGTTCACCTCTGCTCTCCCCCTCCGGGGATTTTGCTTTCGGCTTCCGTGCACTTGATACTGATCCTTCGCTCTTTCTTCTTGCTGTTTACTACAACAAAATCAAGCCCAAAACTGTAATATGGACTGCAAACGGAGACAATCCTGTATCAGAGCAGTCCAAAGCCCAGCTTAATTCAGACGGGCAACTGACCTTACAAGACTCCTCAAATCAACAAATTTGGAGTTCAAATATGGATGGAGCAAGCTCTGGCTCCATGCGTGATGATGGAAATTTCATACTCTACTCTAGTACTTCTTCTATAGTATGGCAGACATTTGATTCTCCTACTGATACTATATTGCCTGGTCAAGTATTGAACCAAAATAGCGCTATGTTCTCAAAACTTACTGACGATGATTATTCAAAAGGGAGATTTAAGTTTATTATGCAGGGCGATGGAAATTTTGTTTTGTATATACTGGACTTTCCAACGCAAACTGATAATAAAGACCACGCCCTTTATTCTACACACACACAAGGTAATCCAGGAAAAACTAGCCTTGTGTTTAATCAGACTGGAAGTCTGTATGTGAAGATTACTGATGGCACTACAGCTGTAGTGTTCCCAGAACCTGTTCTAACTGGAGCCAACTATTTGAGAGCAACTTTGGACTTAGATGGTGGTTTCAGGTTTGCTTTgtacccacacacacacacacacacacacacacacactgacacaGGTGAGAGTAATTTCAGTTTTACAACAGTTAGTTAAATATTTCAGGCAGTATTCCTTTCCGGAGGCGCAGCTAAGCACTGGAAGTTGGAGAATTGCAGCAAATTTTGTTGAAGATCTATGCATGCTCTATGTTTATGTTGGAAGTGGGATATGTGGACCCAATAGTTACTGCACAAAATATGCCAGTGGACTAATCAATTGTCAGTGTGCTCCTCACTACTCTTTCATAGATCCAAACAGAAAATACAAAGGTTGCAAACCAGATTTCATTCCACAACCCTGCGGACAAGGCAGTGGGCCAACTTCCGCTTTTGAAATCGTTAAGCAAATGGATTGGCAATCATATGGAGCCAAAAAGCTTACTCCATTTAATGAAACTCAATGCCAAAATGAATGCTTGAATGATTGCTTTTGTTTGGCTGCTGTATACGACATGGGGACTTGCTATATAAAAGGGCTCCCGCTTGCTAATGGAGTATCAGCACAAAGTTTGAGTGCAGTGACATACATCAAGTATAACAAATTGAGCACAAGTAATAATGGGTCAAGTAACTGGAACGATAACCCAAATCGTGATGGGTCGGGTAACTGGAAGAGTTGGGTAATTATATTATTGTCGATTCTATTTGGTTCTGTAGTACTAATTGGAGCTTGTTGCTGCATGTATCTTAAAAGAAAACTTAAAAATGTTAGGCCAAAGACAGACAGTAATGTCTCAATTTCAGCAGCGTGCTCTTTCACATTCAAAGAGCTGGAACAAGCTACCAAAGAATTCAAAGATGAACTTGGTAAAGGCGGTTTTGGGGTAGTCTATAAAGGAGTCATGCCGTCACAGTCTAATGATAATAATACAGTTGTAGTAGCAGTCAAAAAATTAGAAGAAAGCCTGCTTGAAGAAGGggatcatgattttgaaaatgaaattgctAGTATTGGCCAAACACACCATAAAAATTTAGTACAGCTCATTGGATATTGTAAAGAAGGGTCCCATAGACTTATAGTGTTTGAGTTCCTTAGTAAAGGATCACTTAACAAGTACATCTTTGGAAGCAATCGACCCAAGTGGAATCAAAGAGTACGAATTGCTTTAGGTATTGCAAACGGACTGGCATACTTGCACGAACAATGCAGGAACCAGATTATACATTGTGATATAAAGCCTCAAAATATACTTCTAGACGAGAATATGGAAGCTAGAATCTCAGATTTTGGGTTGGCAAAATTGTTAAGATTTGATCAAACACGGACAGCCACAGGCATTAGAGGAACTATAGGTTATTTTGCGCCAGAATGGTTCAGGAATGTTGGAATCAGTGCAAAGGTAGATGTTTATAGCTTTGGAGTGATGTTATTGCAAATAATTTGCTGTAAAAAGAGATTCGAGTGGGGATTAGAGAGTCATGAAAGAATGACAGTTGTGGACTGGGCGAAGAACTGTTTAGCAAATGAAAGGTTAGATTTGTTAGTTGAGGATGATGAAGAAGCAATGAGTGACGTGATTACGTTACAAAGGTTTACGATGGTTGGTATTTCCTGTGTTGAAGACGAGCCATGGTTAAGACCTACGATGAAGCAGGTTGTGCAAATGCTTGAACAAACAACTTAG

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020241834.1	8.5e-232	G-type lectin S-receptor-like serine/threonine-protein kinase LECRK2 isoform X1
Swissprot	Q7FAZ3.1	2.3e-173	OsRLCK134
trEMBL	A0A5P1FSN2	1.4e-228	Receptor-like serine/threonine-protein kinase

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT5G60900.1	35.56	2e-132	470	RLK1	receptor-like protein kinase 1

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
Asa2G00860	AT5G60900.1	807	387	19	7	778	8	716	35.56	2e-132	470
Asa2G00860	AT1G34300.1	781	455	22	26	781	27	760	32.52	5e-98	355
Asa2G00860	AT2G19130.1	776	452	28	41	778	38	767	30.93	4e-81	299

Ortholog group

Species	Genes
Allium cepa	g126559.t1; g210181.t1; g375190.t1; g520617.t1; g520618.t1; g520640.t1; g520641.t1
Allium fistulosum	AfisC1G06789; AfisC3G01252; AfisC3G01258; AfisC3G01260; AfisC3G01267; AfisC3G01268; AfisC3G01277; AfisC3G01279; AfisC3G01283
Allium sativum	Asa2G00855.1; Asa2G00856.1; Asa2G00860.1; Asa2G00862.1; Asa2G00865.1; Asa2G00867.1; Asa2G00869.1; Asa2G00870.1; Asa2G00876.1; Asa2G00882.1; Asa2G00883.1; Asa2G00885.1; Asa2G00888.1; Asa2G00889.1; Asa2G00892.1; Asa2G00902.1; Asa2G00903.1; Asa2G00904.1; Asa2G00905.1; Asa2G05713.1
Arabidopsis thaliana	AT5G60900.1
Oryza sativa	LOC_Os01g73370.1; LOC_Os04g12540.1; LOC_Os04g12560.1; LOC_Os04g12580.1; LOC_Os04g12600.1; LOC_Os04g39910.1; LOC_Os04g39930.1; LOC_Os06g41510.1

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF01453.21	B_lectin	Domain	74	159	81.0	5e-23
PF07714.14	Pkinase_Tyr	Domain	504	777	161.7	1.8e-47

Gene Ontology

Accession	Ontology	Name
GO:0004672	F	protein kinase activity
GO:0004713	F	protein tyrosine kinase activity
GO:0005524	F	ATP binding
GO:0006468	P	protein phosphorylation

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K00276	AOC3, AOC2, tynA; primary-amine oxidase	EC:1.4.3.21	Glycine, serine and threonine metabolism	ko00260
			Tyrosine metabolism	ko00350
			Phenylalanine metabolism	ko00360
			beta-Alanine metabolism	ko00410
			Isoquinoline alkaloid biosynthesis	ko00950
			Tropane, piperidine and pyridine alkaloid biosynthesis	ko00960

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network