result

Gene information

Detail information of Asa2G00888

Location

Gene	Chr	Start	End	Strand
Asa2G00888	chr2	261713673	261716340	-

Sequences

CDS

>Asa2G00888.1
ATGTTTAATGGTACTACAGTTGGAGTGCTCCCAAATCCTGTTCTAACCGGTGGCAACTATTTAAGGGCAACCTTGGACCCAGATGGTAACTTCAGCGAAGCATCTTTCGCTGTTCAGTCCATTGAGAATCTTGATTGGCCATTTGCTGATGCTGAAAAGCTTACTCCAATGAACGAAACCCAATGCCAAAATGCATGCTTGGTTGACTACTTTTGTATGGTTGCTATATACAACAATAGCGGAACATGCTGGAAAAAGAAGTTCCCACTTTCTAATGGAAAAATGGAACAAAGTGTGAATAGAGTGGCTTACATCAAGTATAATAAATTAAACATTAGTGTCAATGGGTCTAGTGCCTTTGTAAGTTTTGATGGATCGGTTTCTGCATCGTGTTCTTTCACGTACAAAGAGCTGGAACAGGCCACTAAAGGATCTAGCGAAGAGCTTGGTAAAGGAGCTTGTGGCGTAGTTTATAAAGGAGTCCTGCCTTCCCAGTGTAGTAATAATTCACTTGTAGTAGCAGTCAAGAAATTAGAAGAAAGCCTGCTTGAAGAAGGGGAGCAGGATTTTGAAAATGAAATTGCAACCATTGGCCAAACACATCATAAAAATTTAGTGCAACTTATTGGATACTGTAAAGAAGGTTTGCATAGACTTATAGTACTTGAGTTCCTTAGTAAAGGATCACTTAATAAGTACATTTTTGGAAGCAATCGACCCAGCTGGAATCAAAGAGTAAAAATTATTCTTGGTATTGCAAATGGGCTTTCGTATTTACATGAAGAATGTAGAAATCAAATCATACATTGTGATATAAAGCCACAGAATATACTTTTGGATGAGAATATGGAAGCTAGAATCTCAGACTTTGGGTTGGCAAAGCTATTAAGGTTCGACCAGACACGAACAACTACAGGCCTTAGGGGGACCATAGGATATTTTGCACCTGAATGGTTCAAGAGCGTTGCAATTAGTGCAAAGGTCGATGTATACAGCTTCAGAGTGATGTTATTGCAGATAATTTGTTGTAAACGGAATTTTGAGGGTGGAATGCATAGTCATGAAAGAACAACAATTATAGACTGGGCAAAGAATTGTCTTAGGAAAGGAAAGTTGGATTTGTTAGTGGAGGATGATGAAGAAGCAAAGAATGATGGGAATAGATTAGAAAGATTTGTGAAGGTTGGCATTTCTTGCGTTGAAGATGAGCCATGGTTAAGGCCTACCATGAAGAAGGTTGTGCAAATGTTGGAAGAAATAACTGAAAAGAAGAAGGATGCTTATGATGTTAAGGTTGTCTTTCTAGCAGCCTATCGGCATCGTGTCAGACTGAAGCTTGGATAA

Protein

Gene

>Asa2G00888.1
ATGTTTAATGGTACTACAGTTGGAGTGCTCCCAAATCCTGTTCTAACCGGTGGCAACTATTTAAGGGCAACCTTGGACCCAGATGGTAACTTCAGGTAATTTGTTTTATACTTTCAAATGGGTATGATTtagttggcattttatagtttaaataGCTAGTTAGTTGTTCACAAAATCAATTGGTCAATGTGAACTATAGATTCTTAGTAATTAGTAGTTATTCAGGATCTTAACGGAATATTTCCTGATGTGAGGCTATTCTCAACACTCCCCCTTTACGTGTGGTGTATTTGAGCCTACGTGATCACAGTATTTTGGATAGAGTGTCGCACGGATGACGGTTAAGCACGTACGTATCAGTTGAGTTAGTTCAAAACGTTGAACTATTACCATTGTTGTCATTTTGTAATTTAGAGAGCTACTTAGTTGTTCACAAAGCCAATTGGTCGGTATGAACTATAGCTTCTTAGTATTTATTCtggatcttagttgaatatttgCGTGACGTGAGACTATTCTCAATAGATATAACTTGCCTTGTATACTATTCAGGATCTTTGTTGAGTATTCATTTAGGATCTTAGTTTAATATGACTTGCCTTGTATACTATACTTACTATCCTAATTTGACTAAATATTTGCGTGAATGTTCCAGGCAATATGCCTTTCTAAAAGCACAGTTTACCACCGGATGTTGGAGCATCGCAGGAAACCTTATTAGAGATATATGCGGCAAAAATTTAGGGCTTGGAAGTGGAATCTGTGGTTTCAACAGTTACTACACACAAAATAACGATGGATCAACCAATTGTACGTGCCCTCCTCACTACACTTTCATAGACCCAATCAAAAAATACAAAGGCTGCAAACCTGACTACGTTCCACAACCCTGTGAATAAGGCAGCGAAGCATCTTTCGCTGTTCAGTCCATTGAGAATCTTGATTGGCCATTTGCTGATGCTGAAAAGCTTACTCCAATGAACGAAACCCAATGCCAAAATGCATGCTTGGTTGACTACTTTTGTATGGTTGCTATATACAACAATAGCGGAACATGCTGGAAAAAGAAGTTCCCACTTTCTAATGGAAAAATGGAACAAAGTGTGAATAGAGTGGCTTACATCAAGTATAATAAATTAAACATTAGTGTCAATGGGTCTAGTGCCTTTGTAAGTTTTGATGGATCGGGTAAGTGGAGAACAATGATGCATATAGTATCATCAATTCTGGCTTGCCCTGTGGGTTCAAACCTTTTACAAGTTTGTGCTTGTTTTTACATGCATAGAGAAAGGAAACGTTAAAGGGATTCAGCAAAGATAAGCAGTACTGTCTCAGTTTCTGCATCGTGTTCTTTCACGTACAAAGAGCTGGAACAGGCCACTAAAGGATCTAGCGAAGAGCTTGGTAAAGGAGCTTGTGGCGTAGTTTATAAAGGAGTCCTGCCTTCCCAGTGTAGTAATAATTCACTTGTAGTAGCAgtcaagaaattagaagaaagCCTGCTTGAAGAAGGGGAGcaggattttgaaaatgaaattgcaaCCATTGGCCAAACACATCATAAAAATTTAGTGCAACTTATTGGATACTGTAAAGAAGGTTTGCATAGACTTATAGTACTTGAGTTCCTTAGTAAAGGATCACTTAATAAGTACATTTTTGGAAGCAATCGACCCAGCTGGAATCAAAGAGTAAAAATTATTCTTGGTATTGCAAATGGGCTTTCGTATTTACATGAAGAATGTAGAAATCAAATCATACATTGTGATATAAAGCCACAGAATATACTTTTGGATGAGAATATGGAAGCTAGAATCTCAGACTTTGGGTTGGCAAAGCTATTAAGGTTCGACCAGACACGAACAACTACAGGCCTTAGGGGGACCATAGGATATTTTGCACCTGAATGGTTCAAGAGCGTTGCAATTAGTGCAAAGGTCGATGTATACAGCTTCAGAGTGATGTTATTGCAGATAATTTGTTGTAAACGGAATTTTGAGGGTGGAATGCATAGTCATGAAAGAACAACAATTATAGACTGGGCAAAGAATTGTCTTAGGAAAGGAAAGTTGGATTTGTTAGTGGAGGATGATGAAGAAGCAAAGAATGATGGGAATAGATTAGAAAGATTTGTGAAGGTTGGCATTTCTTGCGTTGAAGATGAGCCATGGTTAAGGCCTACCATGAAGAAGGTTGTGCAAATGTTGGAAGGTAATACTGAGCCCATTATCTATTGAAAAATCTATTCAGGTTTTGTGCTGCTGAGCTTAGCCAACTCCCTTAAATCCAGCATGATGCATTTGATATCTGCATTTTTTGTATGTATTTATATGCTGCTTGATAAATGTGGAATATGAATGTTATCTTTGTTGTCTTAAAAGATTGCATTATGTGATTGCTTCTGCATATGAATGTATGAGTTTAAAGTAGCATGTTTCTTCGAATGATCTTTGTCTGTATGATTACCACTTTGGAGTTATCTTGTATGGCTATGTCATGGTGTGCAGTTAAATCTGTTTGCATTGCCGCTTGAAGCATTTGATGAGCAGTAATGACAATTGTAATTATGCCAAATTTAGAAATAACTGAAAAGAAGAAGGATGCTTATGATGTTAAGGTTGTCTTTCTAGCAGCCTATCGGCATCGTGTCAGACTGAAGCTTGGATAA

Functional annotation

Database	accession number	e-value	annotation
nr	ONK79721.1	2.0e-140	uncharacterized protein A4U43_C01F9380
Swissprot	Q7FAZ3.1	9.6e-108	OsRLCK134
trEMBL	A0A5P1FSN2	1.4e-140	Receptor-like serine/threonine-protein kinase

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT5G60900.1	47.80	3e-100	362	RLK1	receptor-like protein kinase 1

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
Asa2G00888	AT5G60900.1	387	186	6	40	422	346	720	47.80	3e-100	362
Asa2G00888	AT1G34300.1	426	194	11	59	424	347	763	38.26	2e-73	273
Asa2G00888	AT4G32300.1	295	147	6	133	420	483	767	44.41	2e-65	246

Ortholog group

Species	Genes
Allium cepa	g126559.t1; g210181.t1; g375190.t1; g520617.t1; g520618.t1; g520640.t1; g520641.t1
Allium fistulosum	AfisC1G06789; AfisC3G01252; AfisC3G01258; AfisC3G01260; AfisC3G01267; AfisC3G01268; AfisC3G01277; AfisC3G01279; AfisC3G01283
Allium sativum	Asa2G00855.1; Asa2G00856.1; Asa2G00860.1; Asa2G00862.1; Asa2G00865.1; Asa2G00867.1; Asa2G00869.1; Asa2G00870.1; Asa2G00876.1; Asa2G00882.1; Asa2G00883.1; Asa2G00885.1; Asa2G00888.1; Asa2G00889.1; Asa2G00892.1; Asa2G00902.1; Asa2G00903.1; Asa2G00904.1; Asa2G00905.1; Asa2G05713.1
Arabidopsis thaliana	AT5G60900.1
Oryza sativa	LOC_Os01g73370.1; LOC_Os04g12540.1; LOC_Os04g12560.1; LOC_Os04g12580.1; LOC_Os04g12600.1; LOC_Os04g39910.1; LOC_Os04g39930.1; LOC_Os06g41510.1

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00069.22	Pkinase	Domain	146	415	159.4	1e-46

Gene Ontology

Accession	Ontology	Name
GO:0004672	F	protein kinase activity
GO:0004713	F	protein tyrosine kinase activity
GO:0005524	F	ATP binding
GO:0006468	P	protein phosphorylation

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K04733	IRAK4; interleukin-1 receptor-associated kinase 4	EC:2.7.11.1	MAPK signaling pathway	ko04010
			NF-kappa B signaling pathway	ko04064
			Toll-like receptor signaling pathway	ko04620
			Toll and Imd signaling pathway	ko04624
			NOD-like receptor signaling pathway	ko04621
			Neurotrophin signaling pathway	ko04722

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network