Detail information of Asa2G02419


Location
GeneChrStartEndStrand
Asa2G02419chr2667573373667587644-



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_020273657.11.1e-144LOW QUALITY PROTEIN: protein IWS1 homolog 1-like
SwissprotF4ICK8.11.7e-116Protein SUPPRESSOR OF BES-1-D 1
trEMBLA0A7I8K0392.4e-144TFIIS N-terminal domain-containing protein

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT1G32130.155.859e-143 503ATIWS1;HNI9;IWS1Transcription elongation factor (TFIIS) family protein

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag113931.t1; g431257.t1
Allium fistulosumAfisC3G01693; AfisC3G07001
Allium sativumAsa0G00083.1; Asa0G05390.1; Asa2G01461.1; Asa2G02419.1; Asa2G03375.1
Arabidopsis thalianaAT1G32130.1; AT1G32130.2
Oryza sativaLOC_Os01g05420.1

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF08711.8Med26Domain33237550.31.6e-13

Gene Ontology
AccessionOntologyName
GO:0003677FDNA binding
GO:0005634Cnucleus
GO:0006351Ptranscription, DNA-templated

KEGG pathway
KONameEnzyme IDPathwayPathway ID
K17498SPN1, IWS1; transcription factor SPN1EC:- --

Expression pattern in different tissues

Expression pattern in BioProjects

Click here to link to expression search in BioProjects.  



Co-expression network

Click here to link to co-expression network search.