Detail information of Asa2G02979


Location
GeneChrStartEndStrand
Asa2G02979chr2796020045796020456+



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_010670296.14.8e-18PREDICTED: U-box domain-containing protein 33 isoform X1
SwissprotQ0DR28.11.3e-17RING-type E3 ubiquitin transferase PUB57
trEMBLA0A0E0D2B22.2e-17U-box domain-containing protein

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT2G45920.156.728e-2092.0U-box domain-containing protein

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag10990.t1; g12872.t1; g135041.t1; g164083.t1; g164085.t1; g183438.t1; g183439.t1; g183440.t1
Allium fistulosumAfisC3G03683; AfisC4G01073; AfisC5G04955; AfisC8G03355
Allium sativumAsa2G02977.1; Asa2G02979.1; Asa4G00779.1
Arabidopsis thalianaAT1G01670.1; AT1G01680.1; AT5G65500.1
Oryza sativaLOC_Os06g06450.1

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF04564.12U-boxDomain289766.91.2e-18

Gene Ontology
AccessionOntologyName
GO:0000151Cubiquitin ligase complex
GO:0004842Fubiquitin-protein transferase activity
GO:0016567Pprotein ubiquitination

KEGG pathway
KONameEnzyme IDPathwayPathway ID
K09553STIP1; stress-induced-phosphoprotein 1EC:- --

Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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