Detail information of Asa2G03279


Location
GeneChrStartEndStrand
Asa2G03279chr2890150666890151070+



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrPLY69747.12.3e-15hypothetical protein LSAT_5X113860
SwissprotQ8VWK4.12.0e-16MYB transcription factor
trEMBLA0A7N0T0U37.5e-16MYB transcription factor

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT1G49950.160.942e-1887.4ATTRB1;TRB1telomere repeat binding factor 1

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag375002.t1
Allium fistulosumAfisC7G01431; AfisC7G01432
Allium sativumAsa0G03406.1; Asa2G03279.1; Asa3G03698.1; Asa3G03699.1; Asa4G01083.1; Asa7G02441.1; Asa8G01481.1
Arabidopsis thalianaAT1G17520.1; AT1G72740.1; AT1G72740.2; AT3G49850.1; AT5G67580.1; AT5G67580.2
Oryza sativaLOC_Os01g51154.1; LOC_Os01g51154.2; LOC_Os01g51154.3

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF00249.28Myb_DNA-bindingDomain14928.31.3e-06

Gene Ontology
AccessionOntologyName
GO:0003682Fchromatin binding

KEGG pathway
KONameEnzyme IDPathwayPathway ID
K09422MYBP; transcription factor MYB, plantEC:- --

Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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