result

Gene information

Detail information of Asa2G04401

Location

Gene	Chr	Start	End	Strand
Asa2G04401	chr2	1192454809	1192456957	-

Sequences

CDS

>Asa2G04401.1
ATGCCATCACTTGAACATTTGTACATGGAAAATAATAAGCTATCTGGAGGGCTTGATTTCATCACTTCTCTTTCGAACTGCGTGAACTTATCAGATGTAGAAATGTTCCAGAATGAGCTTGATGGCATTATTCCGAATTCAGTAGGAAATCTGTCAACACAGCTGCGACATTTCGACTTTGGTGAAAACCATATAAAGGGTAATATTCCTGGGGCATTTGAAAATCTGAAGGGACTTATGCTTCTAAATTTAGAAACAAACAAATTGATTGGACAAATACCTGTTGAAATCACAAAAATAAAAAGTCTTCAAGTTCTCAGCTTGAATCGTAACAAAATTAATGGTGTGATTCCTTCTGAGCTTGGCCTGATGACAAATTTATATTTTTTGAATCTTACACAAAATGAACTCACTGGATCCATACCAGATGGTATTTCAAATCTCATTGGGTTACAGGAGTTGTATTTGGGCTCTAACAAACTGTCATCAAGCATTCCTGCGAGCTTCGGGAATTTACGAGGTCTTGTAAACTTGGACCTTTCTCAAAATATGCTAGGGGGAACACTTCCATCACAATTTGGAAATTTGAATGCCTTGAATAAACTGGATTTATCTCACAATCAACTCTCCGGCAACATTCCAATTAGCTTTGGCCAAATGCAGAAAATTACTTACTTAGATGTTTCCGACAACTCATTGCAAGGTGAAATTCCAGAATCATTCAGCAAACTTTTCAACCTCGGGTACTTAAATCTCTCACATAATCTTCTTTCGGGTAGTATACCGGAATCTTTAGAAAATTTGAGTTACTTAAGCATCTTAGATTTCTCATTCAACAAGCTAGAAGGAAAAATTCCTACTGGTGGAATCTTCTTGAATTCCACAATATCAAATCTGCAAGGAAATAAGGCATTATGTGGAGCTCCTAAACTTAATATTGCATCTTGTCCTTCAACACTCGATACTCTTAATACAAAGAAACATCATTTGCTTATATATATACTCCCACCAACTGCTGCTGCAACAATTTTGCTGGCTTTCTTCTTCCTCGTGATGCAGTTTTGTCTGAAACGTCTAGCAAAGGTCCCATCGGAAGAATTTGCAGTATATTCAGATGGTTATAAACTGATTTCATACAATGAAATAGTTCGTGCCACTGGAAACTTTAGCCAGTCAAACTTATTAGGCAAGGGTAATTTCAGTACGGTATACAAAGCTAACTTAGATGATGGTTCTATAGCAGCAGTAAAAATTTTGAATTTGGATATTGAAGGATCGTCTGATAGCTTTGACGTAGAATGCAGAGCATTGAGCGCACTTCGACACAGAAACCTAGTCAAAATCATAAGCACTTGTTCTAATACTGAGTTCAAAGCTCTGATACTCCAATTCATGTCAAACGGAACTCTGGATCAGTGGTTGCACTCTGAAAATGTAAGTTTAAACTTGCTTCAGAGGATAAACATCATGATAGATGTGTCATTAGCATTAGAGCATCTTCACCATCATCACCACAACATTGTTGTGCATTGTGATTTGAAGCCGAGCAACGTATTGTTGGATGAGAATATGGTTGCATATGCGAGTGACTTCGGGATTGCCAAAATATTGGCCGGCAATGATAGCAAAACAATTGTATCTGCAAATGCACCAGGAACATTAGGTTATATTGCACCAGGTTCAGGAAATGTGACAAGAAGAAGTGATGTCTATAGTTTTGGGATTCTGATATTGGAAACAGTTACAGGGAAAAGTCCTACTGATGCCATGTTTCATGCAGAATTAAGTCTAAGGCAATGGACCAACAATGCATGTCCAGGTGCAATATTTGATATTACTGATAGTAAAATACTAAGAGATGATTCTGTTCAAGCAGCACAAATTGAAGTTCAAAGGAGTTTTCATCACTGTTTGGCATCTGTAATTGAGTTGGGTTTGTTGTGTTCGTGCGACTCACCAGATGAAAGAATGCTTATGAAAGATGTTGTTCCACGTTTGCAGACGATAAAAGTGAACTATTTATCTACATTACCGAGTATGGTTGAAAATAAATGA

Protein

Gene

>Asa2G04401.1
ATGCCATCACTTGAACATTTGTACATGGAAAATAATAAGCTATCTGGAGGGCTTGATTTCATCACTTCTCTTTCGAACTGCGTGAACTTATCAGATGTAGAAATGTTCCAGAATGAGCTTGATGGCATTATTCCGAATTCAGTAGGAAATCTGTCAACACAGCTGCGACATTTCGACTTTGGTGAAAACCATATAAAGGGTAATATTCCTGGGGCATTTGAAAATCTGAAGGGACTTATGCTTCTAAATTTAGAAACAAACAAATTGATTGGACAAATACCTgttgaaatcacaaaaataaaaagtCTTCAAGTTCTCAGCTTGAATCGTAACAAAATTAATGGTGTGATTCCTTCTGAGCTTGGCCTgatgacaaatttatattttttgaatcTTACACAAAATGAACTCACTGGATCCATACCAGATGGTATTTCAAATCTCATTGGGTTACAGGAGTTGTATTTGGGCTCTAACAAACTGTCATCAAGCATTCCTGCGAGCTTCGGGAATTTACGAGGTCTTGTAAACTTGGACCTTTCTCAAAATATGCTAGGGGGAACACTTCCATcacaatttggaaatttgaatgcCTTGAATAAACTGGATTTATCTCACAATCAACTCTCCGGCAACATTCCAATTAGCTTTGGCCAAATGCAGAAAATTACTTACTTAGATGTTTCCGACAACTCATTGCAAGGTGAAATTCCAGAATCATTCAGCAAACTTTTCAACCTCGGGTACTTAAATCTCTCACATAATCTTCTTTCGGGTAGTATACCGGAATCTTTAGAAAATTTGAGTTACTTAAGCATCTTAGATTTCTCATTCAACAAGCTAGAAGGAAAAATTCCTACTGGTGGAATCTTCTTGAATTCCACAATATCAAATCTGCAAGGAAATAAGGCATTATGTGGAGCTCCTAAACTTAATATTGCATCTTGTCCTTCAACACTCGATACTCTTAATACAAAGAAACATCATTTGCTTATATATATACTCCCACCAACTGCTGCTGCAACAATTTTGCTGGCTTTCTTCTTCCTCGTGATGCAGTTTTGTCTGAAACGTCTAGCAAAGGTCCCATCGGAAGAATTTGCAGTATATTCAGATGGTTATAAACTGATTTCATACAATGAAATAGTTCGTGCCACTGGAAACTTTAGCCAGTCAAACTTATTAGGCAAGGGTAATTTCAGTACGGTATACAAAGCTAACTTAGATGATGGTTCTATAGCAGCAgtaaaaattttgaatttggatattgAAGGATCGTCTGATAGCTTTGACGTAGAATGCAGAGCATTGAGCGCACTTCGACACAGAAACCTAGTCAAAATCATAAGCACTTGTTCTAATACTGAGTTCAAAGCTCTGATACTCCAATTCATGTCAAACGGAACTCTGGATCAGTGGTTGCACTCTGAAAATGTAAGTTTAAACTTGCTTCAGAGGATAAACATCATGATAGATGTGTCATTAGCATTAGAGCATCTTCACCATCATCACCACAACATTGTTGTGCATTGTGATTTGAAGCCGAGCAACGTATTGTTGGATGAGAATATGGTTGCATATGCGAGTGACTTCGGGATTGCCAAAATATTGGCCGGCAATGATAGCAAAACAATTGTATCTGCAAATGCACCAGGAACATTAGGTTATATTGCACCAGGTAACTaattttcttgataaaatcgactagTAGACTAAACTTATGTTGTTTATATGACTGAAATTCAGTTACTTTTCTGCAAAAGAGTACGCAGGTTCAGGAAATGTGACAAGAAGAAGTGATGTCTATAGTTTTGGGATTCTGATATTGGAAACAGTTACAGGGAAAAGTCCTACTGATGCCATGTTTCATGCAGAATTAAGTCTAAGGCAATGGACCAACAATGCATGTCCAGGTGCAATATTTGATATTACTGATAGTAAAATACTAAGAGATGATTCTGTTCAAGCAGCACAAATTGAAGTTCAAAGGAGTTTTCATCACTGTTTGGCATCTGTAATTGAGTTGGGTTTGTTGTGTTCGTGCGACTCACCAGATGAAAGAATGCTTATGAAAGATGTTGTTCCACGTTTGCAGACGATAAAAGTGAACTATTTATCTACATTACCGAGTATGGTTGAAAATAAATGA

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020263881.1	7.2e-110	probable LRR receptor-like serine/threonine-protein kinase At3g47570
Swissprot	Q2R2D5.1	3.0e-60	Receptor kinase-like protein Xa21, processed
trEMBL	A0A6I9SHL1	4.4e-101	probable LRR receptor-like serine/threonine-protein kinase At3g47570

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT3G47570.1	38.81	5e-121	432		Leucine-rich repeat protein kinase family protein

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
Asa2G04401	AT3G47570.1	706	392	12	1	674	305	1002	38.81	5e-121	432
Asa2G04401	AT3G47570.1	343	170	8	1	287	113	451	32.94	2e-30	131
Asa2G04401	AT3G47570.1	260	149	2	30	289	68	303	33.46	8e-26	115

Ortholog group

Species	Genes
Allium cepa	g106355.t1
Allium fistulosum	AfisC5G05346; AfisC5G05357; AfisC6G01040
Allium sativum	Asa0G01399.1; Asa0G01592.1; Asa2G00007.1; Asa2G00104.1; Asa2G04401.1; Asa2G04414.1; Asa2G04419.1; Asa2G04421.1; Asa2G04433.1; Asa2G04437.1; Asa2G04438.1; Asa2G04442.1; Asa2G04451.1; Asa2G04488.1; Asa2G04619.1; Asa3G01133.1; Asa3G02093.1; Asa6G05583.1
Arabidopsis thaliana
Oryza sativa	LOC_Os01g49910.1; LOC_Os01g49920.1; LOC_Os02g30540.1; LOC_Os04g13640.1; LOC_Os10g13970.2; LOC_Os11g46960.1; LOC_Os11g47170.1; LOC_Os11g47210.1; LOC_Os11g47240.2; LOC_Os11g47300.1; LOC_Os11g47310.1

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF13855.3	LRR_8	Repeat	126	185	32.6	4.5e-08
PF13855.3	LRR_8	Repeat	190	233	29.3	4.8e-07
PF00560.30	LRR_1	Repeat	246	268	9.7	1.3
PF00069.22	Pkinase	Domain	390	592	129.8	1e-37

Gene Ontology

Accession	Ontology	Name
GO:0005515	F	protein binding
GO:0004672	F	protein kinase activity
GO:0004713	F	protein tyrosine kinase activity
GO:0005524	F	ATP binding
GO:0006468	P	protein phosphorylation

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K13420	FLS2; LRR receptor-like serine/threonine-protein kinase FLS2	EC:2.7.11.1	MAPK signaling pathway - plant	ko04016
K13420		EC:2.7.11.1	Plant-pathogen interaction	ko04626

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network