Detail information of Asa2G05210


Location
GeneChrStartEndStrand
Asa2G05210chr214212393961421241769+



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_020261610.16.8e-34DNA-binding protein MNB1B-like
SwissprotP40621.14.4e-22HMG1/2-like protein
trEMBLD6MK101.5e-27Transcription factor (Fragment)

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT1G20693.263.243e-33 137HMG BETA 1;HMGB2;NFD02;NFD2high mobility group B2

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag141451.t1; g388143.t1; g443843.t1; g443844.t1; g484579.t1; g512347.t1; g512353.t1; g512355.t1; g512359.t1; g523931.t1; g91554.t1
Allium fistulosumAfisC2G06767; AfisC3G03099; AfisC3G06694; AfisC3G06698; AfisC4G00939; AfisC4G01521; AfisC5G02801; AfisC5G06232; AfisC6G03994; AfisC7G03844; AfisC7G05575
Allium sativumAsa2G03851.1; Asa2G05210.1; Asa2G05211.1; Asa2G05212.1; Asa3G02102.1; Asa6G00540.1
Arabidopsis thalianaAT1G20693.1; AT1G20693.2; AT1G20693.3; AT2G17560.1; AT2G17560.2; AT2G17560.3; AT4G35570.1
Oryza sativaLOC_Os09g37910.1

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF00505.16HMG_boxDomain3610584.35.3e-24

Gene Ontology
AccessionOntologyName
---

KEGG pathway
KONameEnzyme IDPathwayPathway ID
K11296HMGB3; high mobility group protein B3EC:- --

Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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