result

Gene information

Detail information of Asa2G05608

Location

Gene	Chr	Start	End	Strand
Asa2G05608	chr2	1541729409	1541731134	+

Sequences

CDS

>Asa2G05608.1
ATGGAAACTTCATTCTTCGGTCTTCTTAATGCTAGTGAAGATGATTGTAACATGAGCAGCAGCTATGATATTAGTATTCCAAAATTTGAAGTTATTTCTCCTCCATCCCTTCCTCTTTCAAATTCCTTACCATCATATTTTGCTACCTTATCTGGACACAGCTCCACAGAGCTTTTAGAACCCCCTGTTCTTCTTAGTTCCTTCAATAATGTCCTCCCATCTCCAACAACAGGGGCAATTCCGTATCAATCTTACTATCCACGGCCAAATTCTACGGATTACACAGACTATCAACAAAACATCAAAGAAGAAGATCATAAGGCATCGAACGAATTTTCGTTCCAAATAACACATAGAAACAATACCTATGAGCAAGGCAATGACTTAAGTAAGCAGGCAGAAACAACTCATGTTCCTCAAGTACTGAAAGAGCAAAACGGTGCAAATGATGGATACAATTGGAGAAAATATGGACAGAAAGTAGTGAAAGGAAGCGAAAATCCAAGGAGTTATTATAAGTGCACATTTCCAGATTGCCAGGTGAAGAAAAAGGTAGAGGGAAGCGCAGATGGTCATATAACTGAAATCGTATATAGGGGGACTCATACTCATCCAGAACCTCAGCCTTCTAGAAGAAATTCAGGCACCTTTCATTTGATTATGAATAACCAAACCCAGCTTCAAGCACCCCAAAGTTCTTTTAGTGCACCATCTGGCACACCTGAAAACTCCTCTGCATCATTTGCTGATGATGATGCAAGCTCTAAGAGGAGAAATCTCAGTGTAGATAGTACTGAACATAATGCTAAGAGAATAAAACAAGAAGGCGATAGCCAGGGAACGAACATAAATGAGACTCGAACGGTAAGAGAGCCTAAAGTTGTGGTTCAAACAACAAGTGATATCGACATACTCGATGATGGATACAGATGGAGAAAGTATGGACAAAAAGTTGTGAAAGGAAATCCTAATCCAAGGAGCTACTACAAATGCACAAGCGCGGACTGTAAAGTGCGAAAGCAAGTAGAAAGGGCTTCACATGATACAAGGGCTGTGATAACAACTTATGAAGGCAGACATAGCCACGACGTCCCACAAGGTCGTGGTAGTGTTGCGATCAATAGATCATCGACAGTTAACAACAGTGCTATTGGAACTGCTATTATAAAGCCTTCTGTTATCTCTAAACACAGGGATAATCAAGCTCCGTTTACATTGGAAATGCTTCAAGCTCCTGATAGCTATAGCCATGGTTCTATGTATCCTGGATATGGAAACTCAGATTACAACATGTTTTCAAAAAATGGTAATGAACCAATGGGAGACTCTTTTGTGAATTCGTTGCTGCTTTGA

Protein

Gene

>Asa2G05608.1
ATGGAAACTTCATTCTTCGGTCTTCTTAATGCTAGTGAAGATGATTGTAACATGAGCAGCAGCTATGATATTAGTATTCcaaaatttgaagttatttctcctcCATCCCTTCCTCTTTCAAATTCCTTACCATCATATTTTGCTACCTTATCTGGACACAGCTCCACAGAGCTTTTAGAACCCCCTGTTCTTCTTAGTTCCTTCAATAATGTAAGAAACTCGATTTTTTTAATCATGTTTTGATACTAATCACTAGTTGAATAATTGATCTAACTTGATTATAAGTGTATGGCTCTTATAAGttatgaatagaaattaatatagaTATACAAAGTACAGATTATATCTGAATATTTGATAGTTTTTCGTATGTTAAACAGGTCCTCCCATCTCCAACAACAGGGGCAATTCCGTATCAATCTTACTATCCACGGCCAAATTCTACGGATTACACAGACTATCAACAAAACATCAAAGAAGAAGATCATAAGGCATCGAACGAATTTTCGTTCCAAATAACACATAGAAACAATACCTATGAGCAAGGCAATGACTTAAGTAAGCAGGCAGAAACAACTCATGTTCCTCAAGTACTGAAAGAGCAAAACGGTGCAAATGATGGATACAATTGGAGAAAATATGGACAGAAAGTAGTGAAAGGAAGCGAAAATCCAAGGAGTTATTATAAGTGCACATTTCCAGATTGCCAGGTGAAGAAAAAGGTAGAGGGAAGCGCAGATGGTCATATAACTGAAATCGTATATAGGGGGACTCATACTCATCCAGAACCTCAGCCTTCTAGAAGAAATTCAGGCACCTTTCATTTGATTATGAATAACCAAACCCAGCTTCAAGCACCCCAAAGTTCTTTTAGTGCACCATCTGGCACACCTGAAAACTCCTCTGCATCATTTGCTGATGATGATGCAAGCTCTAAGAGGAGAAATCTCAGTGTAGATAGTACTGAACATAATGCTAAGAGAATGTAAGTGTTCaaaaaatccattattttttttACTAAAGGTATGGTTATATTTGTTCATCAAAATATAGAATGCATCTAAATATTGTTTGCTGTAACTAATTCAGAAAACAAGAAGGCGATAGCCAGGGAACGAACATAAATGAGACTCGAACGGTAAGAGAGCCTAAAGTTGTGGTTCAAACAACAAGTGATATCGACATACTCGATGATGGATACAGATGGAGAAAGTATGGACAAAAAGTTGTGAAAGGAAATCCTAATCCAAGGTGAGAAGCTCGCATTTATAGAAGTAACACAATATTTTGGTACAATCTAACAGAGTTTCTTCAATGGTATATACTGAAAacgatgtttgttgatttcaggaGCTACTACAAATGCACAAGCGCGGACTGTAAAGTGCGAAAGCAAGTAGAAAGGGCTTCACATGATACAAGGGCTGTGATAACAACTTATGAAGGCAGACATAGCCACGACGTCCCACAAGGTCGTGGTAGTGTTGCGATCAATAGATCATCGACAGTTAACAACAGTGCTATTGGAACTGCTATTATAAAGCCTTCTGTTATCTCTAAACACAGGGATAATCAAGCTCCGTTTACATTGGAAATGCTTCAAGCTCCTGATAGCTATAGCCATGGTTCTATGTATCCTGGATATGGAAACTCAGATTACAACATGTTTTCAAAAAATGGTAATGAACCAATGGGAGACTCTTTTGTGAATTCGTTGCTGCTTTGA

Functional annotation

Database	accession number	e-value	annotation
nr	XP_008809977.1	3.5e-97	WRKY transcription factor WRKY24-like
Swissprot	Q6B6R4.1	2.4e-82	WRKY transcription factor WRKY24
trEMBL	A0A7S8F9L2	1.3e-114	Abiotic stress-related transcription factor

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT2G38470.1	43.58	5e-78	288	ATWRKY33;WRKY33	WRKY DNA-binding protein 33

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
Asa2G05608	AT2G38470.1	452	176	10	19	409	33	466	43.58	5e-78	288
Asa2G05608	AT2G30250.1	397	183	10	3	365	4	387	42.07	1e-69	260
Asa2G05608	AT2G30250.1	77	35	1	138	213	317	393	53.25	2e-15	80.9

Ortholog group

Species	Genes
Allium cepa	g145340.t1; g451471.t1
Allium fistulosum	AfisC3G06830; AfisC3G06833; AfisC3G07098
Allium sativum	Asa2G05606.1; Asa2G05607.1; Asa2G05608.1; Asa2G05609.1; Asa2G05888.1; Asa2G05889.1; Asa2G06099.1; Asa2G06100.1; Asa3G04989.1; Asa8G04341.1
Arabidopsis thaliana	AT5G07100.2
Oryza sativa	LOC_Os01g61080.1

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF03106.12	WRKY	Domain	149	205	84.4	4.7e-24
PF03106.12	WRKY	Domain	306	363	87.4	5.3e-25

Gene Ontology

Accession	Ontology	Name
GO:0003700	F	transcription factor activity, sequence-specific DNA binding
GO:0006355	P	regulation of transcription, DNA-templated
GO:0043565	F	sequence-specific DNA binding

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K13424	WRKY33; WRKY transcription factor 33	EC:-	MAPK signaling pathway - plant	ko04016
K13424	WRKY33; WRKY transcription factor 33	EC:-	Plant-pathogen interaction	ko04626

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network