Detail information of Asa2G07205


Location
GeneChrStartEndStrand
Asa2G07205chr219620115571962021440+



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrRWR94037.11.3e-83homeobox protein knotted-1-like protein 2 isoform X2
SwissprotQ84JS6.12.0e-70Protein KNAT6
trEMBLA0A3S3R1W39.1e-84Homeobox protein knotted-1-like protein 2 isoform X2

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT1G23380.148.528e-76 280KNAT6;KNAT6L;KNAT6SKNOTTED1-like homeobox gene 6

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag45175.t1
Allium fistulosumAfisC3G08682
Allium sativumAsa2G07204.1; Asa2G07205.1
Arabidopsis thalianaAT1G23380.1; AT1G23380.2; AT1G70510.1
Oryza sativa

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF03790.10KNOX1Family6610665.23e-18
PF03791.10KNOX2Family15018552.62.4e-14
PF03789.10ELKDomain22925040.32e-10
PF05920.8Homeobox_KNFamily26930863.98.3e-18

Gene Ontology
AccessionOntologyName
GO:0003677FDNA binding
GO:0003700Ftranscription factor activity, sequence-specific DNA binding
GO:0005634Cnucleus
GO:0006355Pregulation of transcription, DNA-templated
GO:0043565Fsequence-specific DNA binding

KEGG pathway
KONameEnzyme IDPathwayPathway ID
K16670MEIS2; homeobox protein Meis2EC:- --

Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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