result

Gene information

Detail information of Asa2G07377

Location

Gene	Chr	Start	End	Strand
Asa2G07377	chr2	2003818257	2003819857	+

Sequences

CDS

Protein

Gene

>Asa2G07377.1
ATGTACAACAGCAGTTGTAATTATACGATGGCGGCACCAGCataccctccttcttcctcctcgcttGTTAGGAGTAGTAAAAAGGAGGCAATGCGAAAAAAGAGAAGCGATGGCGTACGGAAAGGGGCTTGGAGTAGAGAAGAATATGAACTTCTAAAGAAGTGCATTCAGAAATATGGTGAGGGAAAGTGGAGTTCTGTTCCATCTCGTGCTGGTATTTCATATTACCTAGTCTTTGATTCTTTCTAATTACTAGATATGATATACTTATTATAAATTCATGATTTTTACGCATGGATGCAATCTAGGACTTAAAAGATGCCGAAAAAGCTGTAGGCTCCGGTGGTTGAACTATCTCTCCCCCGCAATACACCGTGGAGAGTTCAAAGACGATGAAATTGACCTTATTTTCAGACTTCACAAGCTCCTGGGCAACATGTACTTAAATCTATACATTGAGATACAAATGTGTATTTTAATAAGCTCCAAATATATTATAGCTCACGATGCATTTTTTGGTGGAACTATATATGCATTCTTTATAGTACTAAGAGGTAGATGGGtgtcttctctttttctttttctcttttcatgCCATTTTGGGAATCCTTCTGTGAATAAACCAATCTTTCatgaaagttgtccagaatgatTGCATAATAACACACAGTGTTCAAAATAGAAGCACATAACAAGTTAAATCATATTTTGAGCATGACCAAGTTAAATCTACTTACAAACTACCTGTTTAAATTATTAATGCGAATGAACATGCACAATAAATAGCATTGGACTCATCTTCTGAATTTAGTTATGGCAAGAAGACACATGCCAGCCCACTCTTAGCTCAAATGAACTCATATATAACGTATTATGTTTACTATATTAGAGATAAAATCCATTTTATGCCATGAAAAACATAGAATGTATATCCAATCAAAAACTAACATATAATTATTTTCCTGTTTGTCTGATGTAATAATTAAGAGCTAGCTAATGCAGACCTTTAATTTGCTTTTTGATTTGGATATCTcttacttctaaaaaaaaaaaaagttacaacGTATGTATCAAAACCATGCATCGCTGCCCTTATTTGTCAAGCCTAATAATTGTAAATTGAATGAAAAACCAGGTGGTCCTTGATAGCCGGAAGAATCCCAGGAAGAACAGGCAATGACATAAAGAACTTGTGGAACACTCGGTTGGGCAGACGGAAGTTAACAACACACGagtttccaaaaaataaaaataaaaaaggcatTAGCATTCATCGCCATTGCATACACTTGAGAGAAACAAATGAGGATGAAGGTTATGCTTGTAGGAAGGGAAAAGCAAATGCTATTTATAAACCACAGCCTAAAAGACTCTCCTCCGCCGAGGCTTCGAACAAAGCTGTAATGGTGCAGCCAAAAGAGACAACCGTGACAGTTGACGAAACAAATGAACATTTGCTTAGGGATTTAACAAATGAAAACAGTGATAGTCTTGCATTATTGGACTACGAGTTCAGTTTCGGTATGATGGACCAGGCTCTGCTCTTTGATGCTTTCAAGGAATGGGAGGAGTTACTCTGTACTACTAACAATCCATGCTAG

Functional annotation

Database	accession number	e-value	annotation
nr	AQP25671.1	8.9e-104	MYB transcription factor
Swissprot	A0A2R6S148.1	2.2e-43	Myb-related protein 1
trEMBL	A0A1S5VID8	6.4e-104	MYB transcription factor

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT1G66370.1	46.93	2e-40	162	AtMYB113;MYB113	myb domain protein 113

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
Asa2G07377	AT1G66370.1	179	76	4	38	215	7	167	46.93	2e-40	162
Asa2G07377	AT1G56650.1	167	65	2	36	201	5	153	49.70	1e-37	153
Asa2G07377	AT1G66380.1	107	31	0	36	142	5	111	71.03	1e-36	150

Ortholog group

Species	Genes
Allium cepa	g312529.t1
Allium fistulosum	AfisC3G03591; AfisC6G00239
Allium sativum	Asa2G07376.1; Asa2G07377.1; Asa4G04707.1
Arabidopsis thaliana	AT1G56650.1; AT1G66380.1; AT1G66390.1
Oryza sativa

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00249.28	Myb_DNA-binding	Domain	41	88	54.9	6.6e-15
PF00249.28	Myb_DNA-binding	Domain	94	137	38.1	1.2e-09

Gene Ontology

Accession	Ontology	Name
GO:0003682	F	chromatin binding

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K09422	MYBP; transcription factor MYB, plant	EC:-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network