Detail information of Asa3G00397
| Gene | Chr | Start | End | Strand |
|---|
| Asa3G00397 | chr3 | 118848011 | 118884184 | - |
| Database | accession number | e-value | annotation |
|---|
| nr | XP_021298245.1 | 9.2e-22 | protein LSD1 |
| Swissprot | Q2QMB3.1 | 2.6e-13 | Putative zinc finger LOL2 |
| trEMBL | A0A6J1BG34 | 6.6e-22 | protein LSD1 |
| TAIR id | % identity | e-value | bit
score | gene aliases | Short description |
|---|
| AT4G20380.2 | 59.02 | 7e-48 | 186 | LSD1 | LSD1 zinc finger family protein |
>>>Show top 3 blast result 
| Query id | Subject id | alignment
length | mis
matches | gap openings | query
start | query
end | subject
start | subject
end | % identity | e-value | bit
score |
|---|
| Asa3G00397 | AT4G20380.7 | 183 | 58 | 4 | 1 | 166 | 6 | 188 | 59.02 | 7e-48 | 186 |
| Asa3G00397 | AT4G20380.2 | 183 | 58 | 4 | 1 | 166 | 6 | 188 | 59.02 | 7e-48 | 186 |
| Asa3G00397 | AT4G20380.6 | 183 | 58 | 4 | 1 | 166 | 1 | 183 | 59.02 | 1e-47 | 185 |
| Pfam ID | Pfam name | type | alignment_start | alignment_end | bit_score | Evalue |
|---|
| PF06943.9 | zf-LSD1 | Domain | 7 | 30 | 41.5 | 7.7e-11 |
| PF06943.9 | zf-LSD1 | Domain | 46 | 69 | 43.5 | 1.9e-11 |
| PF06943.9 | zf-LSD1 | Domain | 84 | 108 | 53.4 | 1.5e-14 |
| KO | Name | Enzyme ID | Pathway | Pathway ID |
|---|
| K12191 | CHMP2A; charged multivesicular body protein 2A | EC:- | Endocytosis | ko04144 |
| Necroptosis | ko04217 |