Detail information of Asa3G00683


Location
GeneChrStartEndStrand
Asa3G00683chr3193438837193439241-



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_020265583.17.0e-41floral homeotic protein APETALA 2
SwissprotA0A0N7KJT8.11.9e-35Protein SHATTERING ABORTION 1
trEMBLA0A5P1EYR35.0e-41Polyadenylate-binding protein

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT5G60120.171.582e-28 121TOE2target of early activation tagged (EAT) 2

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag256880.t1; g329877.t1
Allium fistulosumAfisC4G04821
Allium sativumAsa1G03964.1; Asa2G01500.1; Asa2G02444.1; Asa2G02445.1; Asa3G00682.1; Asa3G00683.1; Asa5G04165.1; Asa5G04167.1; Asa8G03944.1; Asa8G04167.1
Arabidopsis thalianaAT3G54990.1; AT3G54990.2; AT4G36920.1; AT4G36920.2; AT5G67180.1
Oryza sativa

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF00847.17AP2Domain509834.91.3e-08

Gene Ontology
AccessionOntologyName
GO:0003700Ftranscription factor activity, sequence-specific DNA binding
GO:0006355Pregulation of transcription, DNA-templated

KEGG pathway
KONameEnzyme IDPathwayPathway ID
K09284AP2; AP2-like factor, euAP2 lineageEC:- --

Expression pattern in different tissues

Expression pattern in BioProjects

Click here to link to expression search in BioProjects.  



Co-expression network

Click here to link to co-expression network search.