result

Gene information

Detail information of Asa3G01133

Location

Gene	Chr	Start	End	Strand
Asa3G01133	chr3	300850975	300852728	+

Sequences

CDS

>Asa3G01133.1
ATGGCTTCGGGCGATCCACCGTCTGGTCAGCCCTCTAGGCGCAGACAGGCAGAGCGTGCCAGCTCGTGGGTGACCGACCATACGAGACAGCTTGCTGCTCGTTGTTTGGAGCTTGTTCGGAGATCGGGGACGCGTGTGGATCTTTGGGAGATTCTGACGGTACCAAGTTCATTGTCAAATCTTACTCATCTTAAAATGCTTGACCTTTCTCATAATAATTTGGCAGGACAAGTACCAAAAGGCAGAAATTTCTTAAATTCTTGCACTATAATTTTGACTGCAAACAGAGGGCTTTGTGGTGCCCTTCAGTTTAACCTTAAGAACTGTGATTCTTTCTGTGTAAAAGTTAAGTCGGTGAAGAGAAAAACTGTACTTAAATATGTACTACCATCACTGGTTGCCTTAATCGTGGTAATATTTCTCTGCATATGTCTTATATACGCATGTTGCTCGAAGAGGAAGAAAAGGAGATTGATTCAAACAAGCGGGATGCCATTATATGACCATGTATATGTTTCATACTACGAACTCTTTCTTGCAACTGCAAACTTCAGCGAGGAAAATTTACTTGGGAAAGGAGGATTTGGTTCTGTGTTCAAAGGAATTCTTGATAGTGGATTGACCATAGCAGTAAAAGTGTTAGATTTGAATCACGAAGAAGCTTCCAAGAGTTTTGAAAATGGATGCCAAGTTTTGAGAACGGTCAGACATATAAATTTGTTAAAAACCATCAGTGTTTCCTCCAACTTAGATTTCAAAGCTATCATTCTCGAATATATGCCGAATGGAAACCTTGAAAAATGGTTGCATTTCGATGGATATTTTATAAATCTTATGCAAAGACTTAGCATCTTGGTCGATGTAGCTTCAGCACTTGAGTACCTCCACCAGCACCATCATCAAATTGTACTGCACTGCGATTTGAAGCCATCTAACATTTTGTTGGATGACGAATTGGTAGCACATGTAAGCGACTTCGGCATTTCTAAGCTGCTTCTTGATGGCAATGGATCCATGGCAACTGCGAGCATGCCGGGCACCATAGGATACATAGCTCCAGAGTACGCTTCAAGCGGTGCAGTATCAAGAATGGGTGACGTATACAGTTATGGGATTCTAATGCTACTGGGAAGAAACCAGATAGTGAAGTGTTTGGTAAGGAATCCTGTTTGA

Protein

Gene

>Asa3G01133.1
atggcttcgggcgatccaccgtctggtcagccctctaggcgcagacaggcagagcgtgccagctcgtgggtgaccgaccatacgagacagcttgctgctcgttgtttggagcttgttcggagatcggggacgcgtgtggatctttgggagattctgacggtttttcgcaacgatgagcggaatgttgatattgcttaggagcttagcgatgagggcttatgtgcctttatttcatcggagttgaacttattacctcatcgtcgtttattgtagattttcatgtatttgttttaattctagtaccgttgtgttctttatgttttatgaaaaacgtggtcgtgttatgaaatatgttgtcgttatagtttgatgcaattagaatttaattaaatcaaaatcaatcatttaacaatcaaataccacgctcaaataccccgttcgtcgctaaaaacacaattccccttcgctacagtaccacgctcaaataccacgctcaaatgtcacgttcacgttcgttaagaacgcacctaAGTTTAGAAAAGTTTCAAAATGCTCAACTATTTGGATATATCAAAAAATAGGTTTGAAGGTCCCATTCCTGATTCATTCAGCGGGCTTATTAGCATAACCATGATGAATTTATCTCACAATATTTTGTCAGGTACCAAGTTCATTGTCAAATCTTACTCATCTTAAAATGCTTGACCTTTCTCATAATAATTTGGCAGGACAAGTACCAAAAGGCAGAAATTTCTTAAATTCTTGCACTATAATTTTGACTGCAAACAGAGGGCTTTGTGGTGCCCTTCAGTTTAACCTTAAGAACTGTGATTCTTTCTGTGTAAAAGTTAAGTCGGTGAAGAGAAAAACTGTACTTAAATATGTACTACCATCACTGGTTGCCTTAATCGTGGTAATATTTCTCTGCATATGTCTTATATACGCATGTTGCTCGAAGAGGAAGAAAAGGAGATTGATTCAAACAAGCGGGATGCCATTATATGACCATGTATATGTTTCATACTACGAACTCTTTCTTGCAACTGCAAACTTCAGCGAGGAAAATTTACTTGGGAAAGGAGGATTTGGTTCTGTGTTCAAAGGAATTCTTGATAGTGGATTGACCATAGCAGTAAAAGTGTTAGATTTGAATCACGAAGAAGCTTCCAAGAGTTTTGAAAATGGATGCCAAGTTTTGAGAACGGTCAGacatataaatttgttaaaaaccATCAGTGTTTCCTCCAACTTAGATTTCAAAGCTATCATTCTCGAATATATGCCGAATGGAAACCTTGAAAAATGGTTGCATTTCGatggatattttataaatcttatgcAAAGACTTAGCATCTTGGTCGATGTAGCTTCAGCACTTGAGTACCTCCACCAGCACCATCATCAAATTGTACTGCACTGCGATTTGAAGCCATCTAACATTTTGTTGGATGACGAATTGGTAGCACATGTAAGCGACTTCGGCATTTCTAAGCTGCTTCTTGATGGCAATGGATCCATGGCAACTGCGAGCATGCCGGGCACCATAGGATACATAGCTCCAGGTAATTGTATTCGAATtaagatttatatataattttagcaTTTGTATATCCGCTGACAATATGTGCATGATTGTAACAGAGTACGCTTCAAGCGGTGCAGTATCAAGAATGGGTGACGTATACAGTTATGGGATTCTAATGCTACTGGGAAGAAACCAGATAGTGAAGTGTTTGGTAAGGAATCCTGTTTGA

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020276770.1	1.6e-77	putative receptor-like protein kinase At3g47110
Swissprot	Q2R2D5.1	3.2e-51	Receptor kinase-like protein Xa21, processed
trEMBL	A0A6J0PEX9	2.6e-74	receptor kinase-like protein Xa21

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT3G47570.1	40.17	6e-62	234		Leucine-rich repeat protein kinase family protein

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
Asa3G01133	AT3G47570.1	346	184	6	53	375	567	912	40.17	6e-62	234
Asa3G01133	AT5G20480.1	350	177	8	54	375	576	922	40.57	3e-61	232
Asa3G01133	AT3G47580.1	348	183	8	53	375	568	913	39.66	1e-60	230

Ortholog group

Species	Genes
Allium cepa	g106355.t1
Allium fistulosum	AfisC5G05346; AfisC5G05357; AfisC6G01040
Allium sativum	Asa0G01399.1; Asa0G01592.1; Asa2G00007.1; Asa2G00104.1; Asa2G04401.1; Asa2G04414.1; Asa2G04419.1; Asa2G04421.1; Asa2G04433.1; Asa2G04437.1; Asa2G04438.1; Asa2G04442.1; Asa2G04451.1; Asa2G04488.1; Asa2G04619.1; Asa3G01133.1; Asa3G02093.1; Asa6G05583.1
Arabidopsis thaliana
Oryza sativa	LOC_Os01g49910.1; LOC_Os01g49920.1; LOC_Os02g30540.1; LOC_Os04g13640.1; LOC_Os10g13970.2; LOC_Os11g46960.1; LOC_Os11g47170.1; LOC_Os11g47210.1; LOC_Os11g47240.2; LOC_Os11g47300.1; LOC_Os11g47310.1

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00069.22	Pkinase	Domain	185	375	128.7	2.2e-37

Gene Ontology

Accession	Ontology	Name
GO:0004672	F	protein kinase activity
GO:0004713	F	protein tyrosine kinase activity
GO:0005524	F	ATP binding
GO:0006468	P	protein phosphorylation

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K04730	IRAK1; interleukin-1 receptor-associated kinase 1	EC:2.7.11.1	MAPK signaling pathway	ko04010
			NF-kappa B signaling pathway	ko04064
			Toll-like receptor signaling pathway	ko04620
			Toll and Imd signaling pathway	ko04624
			Neurotrophin signaling pathway	ko04722

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network