Detail information of Asa3G02701


Location
GeneChrStartEndStrand
Asa3G02701chr3748417350748425134-



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_016189424.14.1e-61high mobility group B protein 6
SwissprotQ9SUP7.14.1e-50WRKY transcription factor 53
trEMBLA0A444ZZG93.0e-61High mobility group B protein 13

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT4G23800.251.071e-96 3503xHMG-box2HMG (high mobility group) box protein

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag401133.t1
Allium fistulosumAfisC7G02734
Allium sativumAsa3G02698.1; Asa3G02701.1; Asa4G01855.1
Arabidopsis thalianaAT4G11080.1; AT4G23800.1; AT4G23800.2
Oryza sativaLOC_Os02g15810.1

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF00505.16HMG_boxDomain15121161.95.1e-17
PF00505.16HMG_boxDomain24331032.01.2e-07
PF00505.16HMG_boxDomain37043865.53.9e-18

Gene Ontology
AccessionOntologyName
---

KEGG pathway
KONameEnzyme IDPathwayPathway ID
K09273UBTF; upstream-binding transcription factorEC:- --

Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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