result

Gene information

Detail information of Asa3G02984

Location

Gene	Chr	Start	End	Strand
Asa3G02984	chr3	817363526	817364722	+

Sequences

CDS

>Asa3G02984.1
ATGAAATCAAACATGATGCTCCTACTCATCACTGCTCTTCCACCTCTCATACCCGCACAGCCATTCGACTACCCAACCGCAAACCCAGGCACAAAATGGACCAACACTCCCACCCTCAACCACACCATAAACTACCCAGACGGATCAACAATCCGTGCCCTCCTACTGAAAGGAAACCTTGGCCCATCATTTGCGTTTGGCTTCTTCTGCACGGCCCCATGCACCTCCTTCCTCCTCTCCATCTACATCGTGCAGACCAACAGCGGCTCCGGCATCACCGACCTCATGAATGCCTCCCCGCAAGTCGTCTGGTCGGCCAACCGTGACTGCCCTGTCAAAGAAAATGCCACCTTGGCCTTCTCCAACGACGGTGATCTGATCCTGCGCGATTCAGATGGCTCCCTCGTTTGGTCCACCAACACCTCCTCAAAGTCCATGTCAGCCATGTCTATAAACAACATCGGCGAACTCTCCCTATTTACCACGTCAGGCGCTAAAATTTGGTCGTCTGGGGACTACCCAACCGATTCTCTGGCTCTAGGACAAACCTTAAAGCAGGGGGCAAGGCTTGCAGCTAATGCTTCAAAAACAAATCCAAGTACGGGCCTGATATCTCTAAGCGTTGTGGATGGCGGGTTTCAGGCGTTTGTTGGTTCACAGATGTACTACAAGAATGTGGTAGCTACGAACACCATAGCTGGAAAGAGTTCGACGCGTATGACGTTTCGAAATAGGAGCTTGGATGTATATGTTGGGGCTTCGAGTACACCGGTTTTAAGCATGGCATTGCCAGTGGCTTCATTGGTTCAGTACATGAGGTTGGACTACGGTGGTCACTTGAGGATATACGAATGGAGCGATGGGTTTAGGTATGTGATTTGCTCGAGTGAGCAGTGCACGTGCCCAGTTGGAGGTGGGAAGGCTTACTTCAAACCCATTGTTGAGAGGCAACCTAACTTTGGATGCGCTTTGTTGAAGGGTGTGACTTGTAGATCGAAACAGCTTCTTTTTCTGAAAGACATGGGCTACTTTGGTTATTCTGCTGTTACAGCGGATGATGAGGGCGCTAGCGAAGAAGGGTGCAAGAAGCTTTGTTTGAACAAATGTGACTTCTACGGGATGGACTGA

Protein

Gene

>Asa3G02984.1
ATGAAATCAAACATGATGCTCCTACTCATCACTGCTCTTCCACCTCTCATACCCGCACAGCCATTCGACTACCCAACCGCAAACCCAGGCACAAAATGGACCAACACTCCCACCCTCAACCACACCATAAACTACCCAGACGGATCAACAATCCGTGCCCTCCTACTGAAAGGAAACCTTGGCCCATCATTTGCGTTTGGCTTCTTCTGCACGGCCCCATGCACCTCCTTCCTCCTCTCCATCTACATCGTGCAGACCAACAGCGGCTCCGGCATCACCGACCTCATGAATGCCTCCCCGCAAGTCGTCTGGTCGGCCAACCGTGACTGCCCTGTCAAAGAAAATGCCACCTTGGCCTTCTCCAACGACGGTGATCTGATCCTGCGCGATTCAGATGGCTCCCTCGTTTGGTCCACCAACACCTCCTCAAAGTCCATGTCAGCCATGTCTATAAACAACATCGGCGAACTCTCCCTATTTACCACGTCAGGCGCTAAAATTTGGTCGTCTGGGGACTACCCAACCGATTCTCTGGCTCTAGGACAAACCTTAAAGCAGGGGGCAAGGCTTGCAGCTAATGCTTCAAAAACAAATCCAAGTACGGGCCTGATATCTCTAAGCGTTGTGGATGGCGGGTTTCAGGCGTTTGTTGGTTCACAGATGTACTACAAGAATGTGGTAGCTACGAACACCATAGCTGGAAAGAGTTCGACGCGTATGACGTTTCGAAATAGGAGCTTGGATGTATATGTTGGGGCTTCGAGTACACCGGTTTTAAGCATGGCATTGCCAGTGGCTTCATTGGTTCAGTACATGAGGTTGGACTACGGTGGTCACTTGAGGATATACGAATGGAGCGATGGGTTTAGGTGAAAACTGGTGGGAGATGTGATCAATCTGTTTCCGGATGATTGTGCTTACCCGACTGCATGTGGAAGGTATGTGATTTGCTCGAGTGAGCAGTGCACGTGCCCAGTTGGAGGTGGGAAGGCTTACTTCAAACCCATTGTTGAGAGGCAACCTAACTTTGGATGCGCTTTGTTGAAGGGTGTGACTTGTAGATCGAAACAGCTTCTTTTTCTGAAAGACATGGGCTACTTTGGTTATTCTGCTGTTACAGCGGATGATGAGGGCGCTAGCGAAGAAGGGTGCAAGAAGCTTTGTTTGAACAAATGTGACTTCTACGGGATGGACTGA

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020588245.1	2.3e-81	epidermis-specific secreted glycoprotein EP1-like
Swissprot	Q9ZVA4.1	6.3e-12	Putative receptor-like protein kinase-like protein
trEMBL	A0A835R686	6.9e-72	Receptor-like serine/threonine-protein kinase

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT1G78850.1	46.94	4e-19	92.4		D-mannose binding lectin protein with Apple-like carbohydrate-binding domain

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
Asa3G02984	AT1G78850.1	98	51	1	103	200	90	186	46.94	4e-19	92.4
Asa3G02984	AT1G78860.1	83	43	0	103	185	90	172	48.19	3e-18	89.7
Asa3G02984	AT1G16905.1	375	206	14	42	373	42	387	25.87	3e-18	89.4

Ortholog group

Species	Genes
Allium cepa	g273767.t1; g428730.t1; g473895.t1; g509784.t1
Allium fistulosum	AfisC4G03037; AfisC6G00047; AfisC7G02380
Allium sativum	Asa0G01171.1; Asa0G01626.1; Asa0G02323.1; Asa0G02600.1; Asa0G03659.1; Asa2G06552.1; Asa3G02984.1; Asa3G02985.1; Asa3G02986.1; Asa3G02987.1; Asa3G02988.1; Asa3G04544.1; Asa4G01724.1; Asa4G03168.1; Asa4G03173.1; Asa7G07515.1; Asa8G00373.1; Asa8G05976.1; Asa8G05977.1
Arabidopsis thaliana
Oryza sativa	LOC_Os01g72810.1; LOC_Os04g23600.1; LOC_Os04g23620.1; LOC_Os04g23720.1; LOC_Os04g23760.1; LOC_Os06g35870.1

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF01453.21	B_lectin	Domain	101	190	70.4	1e-19

Gene Ontology

Accession	Ontology	Name
-	-	-

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K19355	MAN; mannan endo-1,4-beta-mannosidase	EC:3.2.1.78	Fructose and mannose metabolism	ko00051

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network