Detail information of Asa3G04862


Location
GeneChrStartEndStrand
Asa3G04862chr313527043391352720974+



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_020256079.16.4e-212uncharacterized protein LOC109832971 isoform X1
SwissprotF4IXE7.13.2e-91Repressor of silencing 4
trEMBLA0A804IUP81.0e-179(wild Malaysian banana) hypothetical protein

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT1G05380.144.373e-147 520Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger protein

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag137475.t1; g223673.t1; g493194.t1
Allium fistulosumAfisC2G06783; AfisC7G00016; AfisC8G00984
Allium sativumAsa0G02890.1; Asa1G04050.1; Asa3G04862.1; Asa3G04865.1; Asa7G06343.1
Arabidopsis thalianaAT1G05380.1; AT1G05380.2; AT4G14920.1
Oryza sativaLOC_Os03g53630.1; LOC_Os07g07690.1; LOC_Os07g07690.2

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF16135.2JasFamily32439778.43.2e-22
PF00628.26PHDDomain43948128.87.4e-07

Gene Ontology
AccessionOntologyName
GO:0005515Fprotein binding
GO:0008270Fzinc ion binding

KEGG pathway
KONameEnzyme IDPathwayPathway ID
K10603AIRE; autoimmune regulatorEC:- Ubiquitin mediated proteolysisko04120

Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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