result

Gene information

Detail information of Asa3G04989

Location

Gene	Chr	Start	End	Strand
Asa3G04989	chr3	1392475801	1392477565	-

Sequences

CDS

>Asa3G04989.1
ATGGAAACTTCATTCTTTGGTTTTCTTAATGGCAGTCAAGATGATTTTAGCATGAGCAGCAACTATGATACTGGTACTGGAATCCCAAAATTTAAAACTATTACTCCTCCAACTCTTCCTATTTCAAACTCCTTATCATCTTATTTTGCTACTTTATCTGGCCTCAGCTCCGCCGAGCTTTTACTATCCCCGATTCTTCTTAATACCTCCAACAATGGCCTTCCGTCTCCAACAACGGGAGCGATGCCATATCGATCTTACGAGCCAAAGCCAAGTCCAACAAAGTACACAGGCTATCCACAAAACACCGAAGAACATATGGCGTTTAACGACTTTTCGTTTGAAATAACACCTAGAAGCAATACGTATGAGCATAGCGATGACTTATATTATGATGCGAAAGCAATCAATATTCCCCAAATATTGAAAAAGCAAAAGGGTGCAAATGATGGATACAGCTGGAGAAAATATGGGCAGAAAGTAATGAAACGAAGCGAAAATCCTAGGAGCTATTACAAGTGCACTTTTACAAATTGCCGAATGAAAAAGAAGGTAGAGAGAAGTGCAGACGGTCAAATAACTGAGATCATATATCGCGGAACTCATACTCATCCAAAGCCTCAGTCTTGTAGAAGAAATTCAGGCATCTCTCATCTGTTTATTCATAACCAGTCTCAACTTGAAGCATCTAAAAGTTCATGTAGTGCACTATCTGGCACACCTGAGAACTCTTCTGTTTCATTTGCTGAAGATGATGCTGATGTTGGTGCAAGCTCTAAAAGGAGAAATTTTGGTGTAGATAGCATTGATGAGGATGAACACAATTATGCTAAGAGAATAAATCAAGAAGGCGAAGATGAGGGAGTCAATGTAAACGAGACCCGAGCAGTAAGAGAGCCTAAAGTGGTGGTTCAAACAACAACTGATATCGACATACTTGATGATGGATATAGATGGAGAAAATATGGACAAAAAGTTGTGAAAGGAAACCCTAATCCAAGGAGCTACTACAAATGCACAAGTGCTGGGTGTGATGTTCGAAAGCATGTAGAAAGAGCATCACATGATGCAAGGGCTGTGATAACAACTTATGAAGGCAAACATAACCACGATGTGCCACAAGGTCGATACAGAGGCGCGGTCAATCGATCATCAACAATTGACAACAATGTTATTACAAGACCTTCTGTTGTTTCTAAACACCGGGATAATCAAGCTCCATTTACACTGGAAATGCTTCAAGCTCCTGATAGTTATAATCATGGTTCTATACATTCTGGATATGGAAACTTAAATCATAGCATATATTCTAGACTTGGTAATGAACCGACAGTGGACTCTTTTGTAAATTCGTTGCTGCTATGA

Protein

Gene

>Asa3G04989.1
ATGGAAACTTCATTCTTTGGTTTTCTTAATGGCAGTCAAGATGATTTTAGCATGAGCAGCAACTATGATACTGGTACTGGAATCCCAAAATTTAAAACTATTACTCCTCCAACTCTTCCTATTTCAAACTCCTTATCATCTTATTTTGCTACTTTATCTGGCCTCAGCTCCGCCGAGCTTTTACTATCCCCGATTCTTCTTAATACCTCCAACAATGTAAGAAACCCAAATTTTTAGATCATATTTTGATACTACTCATTTGATGActtattaattaaacttaattgTATGTATATGGTTCTTATAAGTTATGAATATTAATACACATGTAAAGATTGTGTGAATGATTGCTAGTTTCGTAATCATCCAACCTACATCTTTagagagaaaaagaaaattagCTTATTTGGTTTTTTGTATGTTAAACAGGGCCTTCCGTCTCCAACAACGGGAGCGATGCCATATCGATCTTACGAGCCAAAGCCAAGTCCAACAAAGTACACAGGCTATCCACAAAACACCGAAGAACATATGGCGTTTAACGACTTTTCGTTTGAAATAACACCTAGAAGCAATACGTATGAGCATAGCGATGACTTATATTATGATGCGAAAGCAATCAATATTCCCCAAATATTGAAAAAGCAAAAGGGTGCAAATGATGGATACAGCTGGAGAAAATATGGGCAGAAAGTAATGAAACGAAGCGAAAATCCTAGGAGCTATTACAAGTGCACTTTTACAAATTGCCGAATGAAAAAGAAGGTAGAGAGAAGTGCAGACGGTCAAATAACTGAGATCATATATCGCGGAACTCATACTCATCCAAAGCCTCAGTCTTGTAGAAGAAATTCAGGCATCTCTCATCTGTTTATTCATAACCAGTCTCAACTTGAAGCATCTAAAAGTTCATGTAGTGCACTATCTGGCACACCTGAGAACTCTTCTGTTTCATTTGCTGAAGATGATGCTGATGTTGGTGCAAGCTCTAAAAGGAGAAATTTTGGTGTAGATAGCATTGATGAGGATGAACACAATTATGCTAAGAGAATGTACGTATTCAAGGagtccaatttttatttttattttcaaatgttagGGTTATTTTTGCTATCAAAATATAGAATGCCTCTGAATATTGTTTGTTACGATTAATTCAGAAATCAAGAAGGCGAAGATGAGGGAGTCAATGTAAACGAGACCCGAGCAGTAAGAGAGCCTAAAGTGGTGGTTCAAACAACAACTGATATCGACATACTTGATGATGGATATAGATGGAGAAAATATGGACAAAAAGTTGTGAAAGGAAACCCTAATCCAAGGTTAGGAGTTCACCTGTTTTCATATAGAATTTACAACCGTAACTTCATACTGAAAAGAAATAATATTTCTTGATTTCAGGAGCTACTACAAATGCACAAGTGCTGGGTGTGATGTTCGAAAGCATGTAGAAAGAGCATCACATGATGCAAGGGCTGTGATAACAACTTATGAAGGCAAACATAACCACGATGTGCCACAAGGTCGATACAGAGGCGCGGTCAATCGATCATCAACAATTGACAACAATGTTATTACAAGACCTTCTGTTGTTTCTAAACACCGGGATAATCAAGCTCCATTTACACTGGAAATGCTTCAAGCTCCTGATAGTTATAATCATGGTTCTATACATTCTGGATATGGAAACTTAAATCATAGCATATATTCTAGACTTGGTAATGAACCGACAGTGGACTCTTTTGTAAATTCGTTGCTGCTATGA

Functional annotation

Database	accession number	e-value	annotation
nr	XP_030464423.1	7.2e-98	probable WRKY transcription factor 26 isoform X1
Swissprot	Q6IEQ7.1	8.6e-88	WRKY transcription factor WRKY24
trEMBL	A0A7S8F9L2	1.7e-109	Abiotic stress-related transcription factor

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT2G38470.1	53.92	4e-76	282	ATWRKY33;WRKY33	WRKY DNA-binding protein 33

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
Asa3G04989	AT2G38470.1	293	109	5	143	413	178	466	53.92	4e-76	282
Asa3G04989	AT2G30250.1	366	179	8	24	378	39	392	44.81	9e-72	267
Asa3G04989	AT2G30250.1	65	27	1	150	213	329	393	56.92	5e-15	79.3

Ortholog group

Species	Genes
Allium cepa	g145340.t1; g451471.t1
Allium fistulosum	AfisC3G06830; AfisC3G06833; AfisC3G07098
Allium sativum	Asa2G05606.1; Asa2G05607.1; Asa2G05608.1; Asa2G05609.1; Asa2G05888.1; Asa2G05889.1; Asa2G06099.1; Asa2G06100.1; Asa3G04989.1; Asa8G04341.1
Arabidopsis thaliana	AT5G07100.2
Oryza sativa	LOC_Os01g61080.1

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF03106.12	WRKY	Domain	149	205	84.2	5.5e-24
PF03106.12	WRKY	Domain	314	371	89.3	1.4e-25

Gene Ontology

Accession	Ontology	Name
GO:0003700	F	transcription factor activity, sequence-specific DNA binding
GO:0006355	P	regulation of transcription, DNA-templated
GO:0043565	F	sequence-specific DNA binding

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K13424	WRKY33; WRKY transcription factor 33	EC:-	MAPK signaling pathway - plant	ko04016
K13424	WRKY33; WRKY transcription factor 33	EC:-	Plant-pathogen interaction	ko04626

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network