Detail information of Asa4G01393


Location
GeneChrStartEndStrand
Asa4G01393chr4375471747375478268-



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_020264080.11.4e-100uncharacterized protein At4g10930
trEMBLA0A5P1EYB41.0e-100PHD-type domain-containing protein

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT4G10940.159.634e-50 196RING/U-box protein

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Ortholog group
SpeciesGenes
Allium cepag449822.t1
Allium fistulosumAfisC4G01542
Allium sativumAsa4G01392.1; Asa4G01393.1
Arabidopsis thalianaAT4G10930.1; AT4G10940.1
Oryza sativaLOC_Os12g10700.1

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF13639.3zf-RING_2Domain185733.24.1e-08
PF00628.26PHDDomain13216933.82.1e-08

Gene Ontology
AccessionOntologyName
GO:0005515Fprotein binding
GO:0046872Fmetal ion binding
GO:0008270Fzinc ion binding

KEGG pathway
KONameEnzyme IDPathwayPathway ID
K17586PHRF1; PHD and RING finger domain-containing protein 1EC:- --

Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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