Detail information of Asa4G02840


Location
GeneChrStartEndStrand
Asa4G02840chr4750358845750359393+



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrKDO78566.11.1e-31hypothetical protein CISIN_1g0264691mg, partial
SwissprotQ9SFD8.23.0e-31Protein LEAFY COTYLEDON 1
trEMBLA9P3Y27.6e-32CCAAT-box binding factor HAP3-like protein

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT1G21970.149.612e-34 142AtLEC1;EMB 212;EMB212;LEC1;NF-YB9Histone superfamily protein

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag109454.t1; g109456.t1; g250325.t1; g260546.t1; g260547.t1; g260548.t1; g260552.t1; g371567.t1; g371803.t1
Allium fistulosumAfisC1G04939; AfisC1G04942; AfisC1G04943; AfisC1G04944; AfisC1G04946; AfisC1G04949; AfisC1G04953; AfisC1G05059; AfisC3G05230
Allium sativumAsa2G04224.1; Asa4G02840.1
Arabidopsis thalianaAT5G47670.1; AT5G47670.2
Oryza sativa

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF00808.20CBFD_NFYB_HMFDomain16678.82.5e-22

Gene Ontology
AccessionOntologyName
GO:0005622Cintracellular
GO:0003677FDNA binding
GO:0043565Fsequence-specific DNA binding

KEGG pathway
KONameEnzyme IDPathwayPathway ID
K08065NFYB, HAP3; nuclear transcription Y subunit betaEC:- Antigen processing and presentationko04612

Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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