result

Gene information

Detail information of Asa4G03168

Location

Gene	Chr	Start	End	Strand
Asa4G03168	chr4	852407394	852408815	+

Sequences

CDS

>Asa4G03168.1
ATGCAGCAGCCATTTCTTTACTCGCTCTTCCTCTCCGTCATCATCACCCACTCTCTCTTACTAAGAAGCACCGCTCAGCCTTTCGATTACCCATCAGCAAACATATCAACAAAATGGACAAACAATCCGTCCATGCAACACCACGCCACGTTTAGTGACGGCGTATCCGTTAGATCCATCCTCCTACGGGGAACGTTCGGCCCAGCATTTGCCTGCGGTTTCGTCTGCTCTGGCTCATGCAAATCCTTCCTGTTCTCCATCTTCATAGTCTATGCCAACAGCGGCGGCGGCATGACCGGCGCTACCTACGCCTCCCCTCAAATTGTCTGGTCCGCTAACCGCGACCGTCCTGTTCGAGAAAATGCCACACTGGACTTCTCAGAAAATGGCGACTTAACCTTACGTGATTTCGACGGCTCCGTAGTCTGGTTCAGTAATACTGCAGGAAAATCCGTAATCGGTATGGATATAAACAAAGTAGGAACTTTAGTTCTCTTTGACGACAAGAATCGAACAGTTTGGTCATCTATCGACTACCCTACGGATTCTTTAGTTCTCGGTCAAACTCTAAGGGAGGGTCTACGTCTGACAGCGAATGCCTCCGTTACCAATTCCAGCCAAGGTCAGTTGTATCTTAGCGTTGTCAGAGGTGGTTTTCGGACGTTTGTTGGTTCACAAATGTACTACGAGAACATTAATACTAATCCTGCGCAGAAAAAGGCTACCTATGTTTCGTTTAACAATGGCAGCTTGGACACTTTTTCTGATGCTTCAGCTCCGGATTCCTCTTTGCCTTTACCGTTGGCAAGTTCCGTTCAGTACATGCGACTTGATTATGGGGGTCATTTGAGGATTTATGAATGGAAGCCCTCTGGCTGGGCTCTTTCAGGGGATGCTTTTGAATTATTCCCAGACGATGATTGTGCTTATCCTACTGTGTGTGGAGAGTACGGAGTATGCTCAGACGGACAGTGTACTTGTCCTGCTTTAGCAAATAACAGCTTGACTTACTTTAGGCCAATCGACAAGAGGAATCCTAATATCGGTTGCATGCCAATTAACACTATTTCTTGCCAGTCAAACAAATCACAAGAATTTCTATTCCTTCACAACGTGTCTTATTTCAATTTTATCGACTATGCAGATGCGGACATGAACGATACAAACGCAGAAGCTTGCAAACAAGCATGTTTGGCGAACTGTTCTTGCAAAGCTGCACTTTTTCAGTATGGTCCGAATGCTTCTAGCGGTTACTGTCATTTGCCATCTCAGTTGTACTCATTGATGAACAATAAACCAGATGTTACACACTATAACTCATCTGCATTTATCAAAGTGCAATCCTTCCCTGTTACTAATTCTACGTCTAGAGCAACTCTAGCAACTTTTCAGGAAGCGAAGAAGTTAACACTGGATTTATAG

Protein

Gene

Functional annotation

Database	accession number	e-value	annotation
nr	XP_008791435.1	1.4e-136	LOW QUALITY PROTEIN: G-type lectin S-receptor-like serine/threonine-protein kinase SD2-5
Swissprot	O64783.2	5.7e-18	G-type lectin S-receptor-like serine/threonine-protein kinase At1g61370
trEMBL	A0A8D7A9U0	4.9e-123	(wild Malaysian banana) hypothetical protein

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT1G16905.1	28.50	1e-28	124		Curculin-like (mannose-binding) lectin family protein

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
Asa4G03168	AT1G16905.1	379	207	12	96	445	76	419	28.50	1e-28	124
Asa4G03168	AT1G78830.1	343	196	11	109	409	94	426	27.70	2e-26	117
Asa4G03168	AT1G78820.1	343	198	12	109	409	94	426	27.11	9e-26	115

Ortholog group

Species	Genes
Allium cepa	g273767.t1; g428730.t1; g473895.t1; g509784.t1
Allium fistulosum	AfisC4G03037; AfisC6G00047; AfisC7G02380
Allium sativum	Asa0G01171.1; Asa0G01626.1; Asa0G02323.1; Asa0G02600.1; Asa0G03659.1; Asa2G06552.1; Asa3G02984.1; Asa3G02985.1; Asa3G02986.1; Asa3G02987.1; Asa3G02988.1; Asa3G04544.1; Asa4G01724.1; Asa4G03168.1; Asa4G03173.1; Asa7G07515.1; Asa8G00373.1; Asa8G05976.1; Asa8G05977.1
Arabidopsis thaliana
Oryza sativa	LOC_Os01g72810.1; LOC_Os04g23600.1; LOC_Os04g23620.1; LOC_Os04g23720.1; LOC_Os04g23760.1; LOC_Os06g35870.1

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF01453.21	B_lectin	Domain	107	197	64.4	7.5e-18
PF08276.8	PAN_2	Domain	360	410	23.8	3.2e-05

Gene Ontology

Accession	Ontology	Name
-	-	-

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K19355	MAN; mannan endo-1,4-beta-mannosidase	EC:3.2.1.78	Fructose and mannose metabolism	ko00051

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network