Detail information of Asa4G03727


Location
GeneChrStartEndStrand
Asa4G03727chr410299228601029931945+



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_029117149.17.7e-105uncharacterized protein LOC105033425 isoform X2
SwissprotF4JTF6.12.5e-20Protein PICKLE RELATED 2
trEMBLA0A6I9QBY85.5e-105uncharacterized protein LOC105033425 isoform X1

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT4G31900.127.414e-1889.7CHR7;PKR2chromatin remodeling factor, putative

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag297461.t1; g349208.t1; g349209.t1; g377188.t1
Allium fistulosumAfisC1G04777; AfisC1G04778; AfisC1G04779; AfisC1G04796; AfisC1G05133; AfisC1G05141; AfisC1G05142; AfisC1G05143; AfisC1G05144; AfisC1G05145; AfisC3G08571
Allium sativumAsa2G07113.1; Asa2G07114.1; Asa4G03727.1
Arabidopsis thaliana
Oryza sativaLOC_Os02g02050.1; LOC_Os06g01320.1

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF00176.20SNF2_NFamily27135829.23.3e-07

Gene Ontology
AccessionOntologyName
GO:0003677FDNA binding
GO:0005524FATP binding

KEGG pathway
KONameEnzyme IDPathwayPathway ID
K11643CHD4, MI2B; chromodomain-helicase-DNA-binding protein 4EC:3.6.4.12 --

Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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