Detail information of Asa4G03917


Location
GeneChrStartEndStrand
Asa4G03917chr410826373031082660607-



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrONK64081.11.5e-304uncharacterized protein A4U43_C07F21890
SwissprotQ80Y84.13.5e-96[histone H3]-trimethyl-L-lysine(4) demethylase 5B
trEMBLA0A5P1EHA01.1e-304Lysine-specific demethylase JMJ14

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT1G63490.157.282e-168 589transcription factor jumonji (jmjC) domain-containing protein

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag272094.t1
Allium fistulosumAfisC2G00021
Allium sativumAsa4G03916.1; Asa4G03917.1
Arabidopsis thalianaAT1G63490.1
Oryza sativaLOC_Os06g51490.1

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF01388.18ARIDDomain25324.72.4e-05
PF00628.26PHDDomain9914638.95.3e-10
PF02373.19JmjCDomain270386137.81.9e-40
PF02928.13zf-C5HC2Domain47952852.34.7e-14

Gene Ontology
AccessionOntologyName
GO:0005515Fprotein binding
GO:0005622Cintracellular
GO:0003677FDNA binding
GO:0005634Cnucleus
GO:0008270Fzinc ion binding

KEGG pathway
KONameEnzyme IDPathwayPathway ID
K11446KDM5, JARID1; [histone H3]-trimethyl-L-lysine4 demethylaseEC:1.14.11.67 --

Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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