Detail information of Asa4G03996


Location
GeneChrStartEndStrand
Asa4G03996chr410994847321099493797-



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_020273236.10.0e+00homeobox-leucine zipper protein HOX32-like
SwissprotQ6AST1.10.0e+00OsHox32
trEMBLI0IUI50.0e+00Class III homeobox-leucine zipper protein

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT2G34710.170.750.01134ATHB-14;ATHB14;PHB;PHB-1DHomeobox-leucine zipper family protein / lipid-binding START domain-containing protein

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag239225.t1; g376311.t1
Allium fistulosumAfisC1G01714; AfisC5G03332; AfisC8G00145
Allium sativumAsa1G04590.1; Asa4G03996.1; Asa6G04755.1; Asa7G01570.1
Arabidopsis thalianaAT1G30490.1; AT2G34710.1; AT5G60690.1
Oryza sativaLOC_Os03g01890.1; LOC_Os03g01890.2; LOC_Os03g43930.1; LOC_Os03g43930.2; LOC_Os10g33960.1; LOC_Os10g33960.2; LOC_Os12g41860.1

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF00046.26HomeoboxDomain238057.39.3e-16
PF01852.16STARTDomain171379168.61.1e-49
PF08670.8MEKHLADomain703805106.01.3e-30

Gene Ontology
AccessionOntologyName
GO:0003700Ftranscription factor activity, sequence-specific DNA binding
GO:0006355Pregulation of transcription, DNA-templated
GO:0043565Fsequence-specific DNA binding

KEGG pathway
KONameEnzyme IDPathwayPathway ID
K09338HD-ZIP; homeobox-leucine zipper proteinEC:- --

Expression pattern in different tissues

Expression pattern in BioProjects

Click here to link to expression search in BioProjects.  



Co-expression network

Click here to link to co-expression network search.