result

Gene information

Detail information of Asa4G04440

Location

Gene	Chr	Start	End	Strand
Asa4G04440	chr4	1219519453	1219521334	+

Sequences

CDS

>Asa4G04440.1
ATGATGTTACTGAATATACTTTGCTTTGTATTCATTTTTCTTGTGATTGCATTGGCAAATATTAAGAGAAGAAATCAAGCAAAGTACAATCTCCCACCAGGACCAATAAACCTGCCAATAACTGGAATCCTCCATAAACTTAGCGGGCTTCCACATCGTTCGTTCTACAAATTCTCTCAAAAATATGGACCACTTGTTTTCTTCAAAGTGGGTAGCATCCCTACAGTAGTTGCTTCTTCTCTTGAAACCGCGAGGGAGTTCTTGAAAACTAATGATCTTAACTGTTGCAGCAGGCCACTTCTCACCTCTTCGGACAAATTTACCTATGGCTTCCACGATGTTGCCTTGACACCATATGGTCAAGAATGGAGAGTCCTTCGTAAAATTTGTATGATCGAGCTCTTTAATACAAGAAAGGTAGCATCGTTCCGATTTATCAGAGAAGAAGAGGTTGAAAATATGATGAAAAATATATCGTTTTCTCGAAATACAGAAATCAATCTAGGGGAGGAGCTTATGTTGCTTGCAAATAATATTACATGCAGGACTGCACTAGGAAAAAAGTATTTGAGAGAAGGTGGTGGAGCAAACATACTTAAAATTTTGAAGGAAACACAAGCATTGTTCATGGCTTTCTTTTATGCTGATTGCATACCCATGCTTGGATGGCTCGATGTTCTTAATGGTACACACGCTAGGTTACAGAAGAACTTTCTTCAACTGGATGAAGTATATCAGCAGGTCATTGACGCACATATCAACAAAGAAGACTGTTTTTCAAGTGATACCGACAATTCGGAAGACATTGTTGATACACTATTACATATCCAGAGAACTTCAAATGAGTTGACCACCGAACAGATTAAGGGGATTCTTATGAATATATTTGTAGGTGGGTCAGACACGTCATCTGCGGCAGTCGAATGGGCAATGTCGGAACTAATGAGGAATCCGAAAGAAATGAAAAAAGCACAACAAGAAGTGAGGGGAATGTTCATGAAAAAGAATGGAAAGATAGAAGAAAGTGAGATAGATAAGCTTACATATATGAATTGTGTAGTAAAGGAGACGATGAGAATGCACCCACCAGCGCCGCTACTAGTTCAAAGAGAGACAATGCAACATTTCAAGGTCAATGGCTACGATATTCTTCCAAAAACAAGATTGATTATCAATGCATGGGCAATGGGAAGAGATCCAAATGTTTGGGAGAAGCCCAATGAATTCAGTCCAGAGAGATTCATGGATAGCCCAATAAACTTTTGGGGACATGATTTTGAGCTGATACCATTTGGAGCTGGAAGAAGGATATGTCCAGGAATGCATATGGGCCTTGCTGTGGTTGAGATTGCTTTGGCCAATTTACTTTACCATTTTGATTGGAAATTGCCTGAAGGAACGACGATAGAGGATATCGACATGGATGAATCTCCTGGAATTACTGTTCACAGAAACTCTGCACTTAAACTCGTGGCTGTGCCTGTAAAACATGGAGAAGACTGA

Protein

Gene

>Asa4G04440.1
ATGATGTTACTGAATATACTTTGCTTTGTATTCATTTTTCTTGTGATTGCATTGGCAAATATTAAGAGAAGAAATCAAGCAAAGTACAATCTCCCACCAGGACCAATAAACCTGCCAATAACTGGAATCCTCCATAAACTTAGCGGGCTTCCACATCGTTCGTTCTACAAATTCTCTCAAAAATATGGACCACTTGTTTTCTTCAAAGTGGGTAGCATCCCTACAGTAGTTGCTTCTTCTCTTGAAACCGCGAGGGAGTTCTTGAAAACTAATGATCTTAACTGTTGCAGCAGGCCACTTCTCACCTCTTCGGACAAATTTACCTATGGCTTCCACGATGTTGCCTTGACACCATATGGTCAAGAATGGAGAGTCCTTCGTAAAATTTGTATGATCGAGCTCTTTAATACAAGAAAGGTAGCATCGTTCCGATTTATCAGAGAAGAAGAGGTTGAAAATATGATGAAAAATATATCGTTTTCTCGAAATACAGAAATCAATCTAGGGGAGGAGCTTATGTTGCTTGCAAATAATATTACATGCAGGACTGCACTAGGAAAAAAGTATTTGAGAGAAGGTGGTGGAGCAAACATACTTAAAATTTTGAAGGAAACACAAGCATTGTTCATGGCTTTCTTTTATGCTGATTGCATACCCATGCTTGGATGGCTCGATGTTCTTAATGGTACACACGCTAGGTTACAGAAGAACTTTCTTCAACTGGATGAAGTATATCAGCAGGTCATTGACGCACATATCAACAAAGAAGACTGTTTTTCAAGTGATACCGACAATTCGGAAGACATTGTTGATACACTATTACATATCCAGAGAACTTCAAATGAGTTGACCACCGAACAGATTAAGGGGATTCTTATGGTAATATGTACCCTTTCACTTTGATGCCTTGTTTTTAATGATGCCCGGTGATTTACagtctatgcaagtttataatgaTTGGTACGTACAAAGTAAACTAAATTATTCATATCTCCACTTAATAAATCTCACCTTAATCTGATGGCTTTTAGGAAAGTAAACAGATTAGATTAGATAGTGTTCAAACAAATACATACTTCCATAATGCAGAGTTTACAAGCAACGGTTTGTTTGATtcctatgtaattttctttttctaacaagggaaaaaatatatatttaaacagtgATATGACTCTCTGCCGAACTCAAGATTCCACATTTACCAAGTTGCATTGtatatatgaagttattttaaaataatcctttCTCTTTGTAGAATATATTTGTAGGTGGGTCAGACACGTCATCTGCGGCAGTCGAATGGGCAATGTCGGAACTAATGAGGAATCCGAAAGAAATGAAAAAAGCACAACAAGAAGTGAGGGGAATGTTCATGAAAAAGAATGGAAAGATAGAAGAAAGTGAGATAGATAAGCTTACATATATGAATTGTGTAGTAAAGGAGACGATGAGAATGCACCCACCAGCGCCGCTACTAGTTCAAAGAGAGACAATGCAACATTTCAAGGTCAATGGCTACGATATTCTTCCAAAAACAAGATTGATTATCAATGCATGGGCAATGGGAAGAGATCCAAATGTTTGGGAGAAGCCCAATGAATTCAGTCCAGAGAGATTCATGGATAGCCCAATAAACTTTTGGGGACATGATTTTGAGCTGATACCATTTGGAGCTGGAAGAAGGATATGTCCAGGAATGCATATGGGCCTTGCTGTGGTTGAGATTGCTTTGGCCAATTTACTTTACCATTTTGATTGGAAATTGCCTGAAGGAACGACGATAGAGGATATCGACATGGATGAATCTCCTGGAATTACTGTTCACAGAAACTCTGCACTTAAACTCGTGGCTGTGCCTGTAAAACATGGAGAAGACTGA

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020264444.1	1.2e-159	cytochrome P450 71A9-like
Swissprot	O65788.2	6.3e-124	Cytochrome P450 71B2
trEMBL	A0A6P5EMB1	1.0e-147	cytochrome P450 71A1-like isoform X1

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT1G13080.1	45.22	3e-125	445	CYP71B2	cytochrome P450, family 71, subfamily B, polypeptide 2

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
Asa4G04440	AT1G13080.1	502	255	7	6	493	4	499	45.22	3e-125	445
Asa4G04440	AT3G26180.1	507	269	6	2	496	1	502	43.59	1e-122	437
Asa4G04440	AT5G57260.1	491	248	8	16	493	18	498	44.81	1e-122	436

Ortholog group

Species	Genes
Allium cepa	g188955.t1; g188956.t1; g374713.t1; g421063.t1; g422708.t1; g95344.t1; g95346.t1
Allium fistulosum	AfisC4G07006; AfisC5G02654; AfisC5G02688; AfisC5G02689; AfisC5G02694; AfisC5G02707
Allium sativum	Asa0G03530.1; Asa0G05283.1; Asa4G00056.1; Asa4G00057.1; Asa4G01625.1; Asa4G04440.1; Asa4G04446.1; Asa4G04449.1; Asa4G04451.1; Asa4G04481.1; Asa5G05828.1; Asa8G01235.1
Arabidopsis thaliana	AT1G13080.1; AT1G13100.1; AT3G26150.1; AT3G26160.1; AT3G26180.2; AT3G26220.1; AT3G26230.1; AT3G26270.1; AT3G26280.1
Oryza sativa	LOC_Os12g32850.1

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00067.19	p450	Domain	32	483	301.8	7.2e-90

Gene Ontology

Accession	Ontology	Name
GO:0009055	F	electron carrier activity
GO:0005506	F	iron ion binding
GO:0055114	P	oxidation-reduction process
GO:0016705	F	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
GO:0020037	F	heme binding

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K00512	CYP17A; steroid 17alpha-monooxygenase / 17alpha-hydroxyprogesterone deacetylase	EC:1.14.14.19 1.14.14.32	Steroid hormone biosynthesis	ko00140
			Ovarian steroidogenesis	ko04913
			Prolactin signaling pathway	ko04917
			Cortisol synthesis and secretion	ko04927

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network