Detail information of Asa4G05545


Location
GeneChrStartEndStrand
Asa4G05545chr415141568911514157106-



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrPKA53387.17.3e-29Transcriptional corepressor LEUNIG
SwissprotO48847.11.0e-27Protein MUCILAGE-MODIFIED 1
trEMBLA0A2I0ACW25.3e-29Transcriptional corepressor LEUNIG

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT2G32700.182.865e-31 129LUH;MUM1LEUNIG_homolog

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Ortholog group
SpeciesGenes
Allium cepa
Allium fistulosumAfisC6G03213
Allium sativumAsa4G05540.1; Asa4G05545.1; Asa7G04219.1; Asa7G06043.1; Asa7G07065.1
Arabidopsis thaliana
Oryza sativaLOC_Os01g08190.5

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF08513.8LisHDomain12534.01.7e-08

Gene Ontology
AccessionOntologyName
GO:0005515Fprotein binding
GO:0003697Fsingle-stranded DNA binding

KEGG pathway
KONameEnzyme IDPathwayPathway ID
K19720COL3A; collagen, type III, alphaEC:- Platelet activationko04611
Relaxin signaling pathwayko04926
Protein digestion and absorptionko04974

Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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