Detail information of Asa5G00103


Location
GeneChrStartEndStrand
Asa5G00103chr53024200330242935-



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_020244497.12.4e-26NAC domain-containing protein 7-like
SwissprotF4HYV5.12.7e-22Protein VASCULAR RELATED NAC-DOMAIN 5
trEMBLG7LCZ01.5e-25Putative transcription factor NAM family

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT1G62700.165.331e-23 105ANAC026;VND5Arabidopsis NAC domain containing protein 26

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag220886.t1; g246110.t1; g297082.t1; g339350.t1; g417.t1
Allium fistulosumAfisC1G04162; AfisC2G01067; AfisC2G08262; AfisC5G03408; AfisC8G02567
Allium sativumAsa3G02305.1; Asa5G00103.1; Asa6G01072.1; Asa6G01073.1; Asa7G04928.1
Arabidopsis thalianaAT1G12260.1; AT1G62700.1; AT1G71930.1; AT2G18060.1; AT4G36160.1; AT5G66300.1
Oryza sativaLOC_Os02g42970.1; LOC_Os03g03540.1; LOC_Os06g01480.1; LOC_Os08g01330.1; LOC_Os10g38834.1

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF02365.12NAMFamily12722.50.00014

Gene Ontology
AccessionOntologyName
GO:0003677FDNA binding
GO:0006355Pregulation of transcription, DNA-templated

KEGG pathway
KONameEnzyme IDPathwayPathway ID
K12581CNOT7_8, CAF1, POP2; CCR4-NOT transcription complex subunit 7/8EC:- RNA degradationko03018

Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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