Detail information of Asa5G01221


Location
GeneChrStartEndStrand
Asa5G01221chr5288892445288898159-



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_008803137.18.0e-22proteasome subunit alpha type-2-A
SwissprotO23708.15.9e-22Proteasome component 3
trEMBLA0A8B7CNW15.7e-22Proteasome subunit alpha type

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT1G16470.141.612e-25 111PAB1proteasome subunit PAB1

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepa
Allium fistulosumAfisC1G07504; AfisC1G07505
Allium sativumAsa0G05530.1; Asa5G00793.1; Asa5G00794.1; Asa5G01107.1; Asa5G01221.1
Arabidopsis thaliana
Oryza sativa

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF00227.23ProteasomeDomain12817027.02.5e-06

Gene Ontology
AccessionOntologyName
GO:0004298Fthreonine-type endopeptidase activity
GO:0005839Cproteasome core complex
GO:0051603Pproteolysis involved in cellular protein catabolic process

KEGG pathway
KONameEnzyme IDPathwayPathway ID
K02726PSMA2; 20S proteasome subunit alpha 2EC:3.4.25.1 Proteasomeko03050

Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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