Detail information of Asa5G01689


Location
GeneChrStartEndStrand
Asa5G01689chr5424534272424538678-



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_010926841.13.4e-81squamosa promoter-binding-like protein 16
SwissprotQ0J0K1.14.5e-46Squamosa promoter-binding-like protein 18
trEMBLA0A6I9RQQ52.4e-81squamosa promoter-binding-like protein 16

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT5G50570.140.945e-38 154SPL13;SPL13ASquamosa promoter-binding protein-like (SBP domain) transcription factor family protein

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag324042.t1; g519605.t1
Allium fistulosumAfisC2G01928; AfisC5G01443; AfisC5G06098; AfisC7G00933
Allium sativumAsa1G00760.1; Asa4G00969.1; Asa4G01000.1; Asa5G01689.1; Asa6G05722.1; Asa7G05643.1; Asa7G06666.1
Arabidopsis thalianaAT5G50570.1; AT5G50570.2; AT5G50670.1
Oryza sativaLOC_Os11g30370.1

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF03110.11SBPDomain83156104.32.7e-30

Gene Ontology
AccessionOntologyName
GO:0003677FDNA binding
GO:0005634Cnucleus

KEGG pathway
KONameEnzyme IDPathwayPathway ID
K13415BRI1; protein brassinosteroid insensitive 1EC:2.7.10.1 2.7.11.1 Plant hormone signal transductionko04075

Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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