result

Gene information

Detail information of Asa5G02216

Location

Gene	Chr	Start	End	Strand
Asa5G02216	chr5	572315575	572317518	+

Sequences

CDS

Protein

Gene

>Asa5G02216.1
ATGGCTGATTGTGCAGCAATGGCTGACCAAGCTTTCCCAGATCGTCAGCTGACTATTCTGTCAGTTGATGACAGCTTAGTTTGCCTGAGAATCTTGGAAGCTAAACTGCTCCAGTGTAAATATAATGGtttgttaaatttatttcttttttttttttttttttttttttttttttttttttatttatttatacccatTTTTAGGACACTTCTTAATTGTCACTGATCAGATTAAGTTTATTATGTTACTGAAATTTACTGCTTTGATCATTGAAATGGAaagatgcaaatataaaaattaatcaaTGCATGTACTATCATTAACTTTTACTTATCATTGTTGTGATTTACCATGCATGATTATAATTTAGTTGTATATGTATCATTTTCAGTGATATCAACCAGTTCAGCTGCTGAAGCATTGAACATCCTGAGAGCAAAAGAtcccaaatttgatattattattacggATGTTCATATGCCTGACATGGATGGGTTTGAGCTACTGAAGCAAGTAGGTCTGGAAATGGACCTTCCATGCATTAGTAAGTCGTTGACTTTATTTTAGTTAGGGCTTGATATCAACTTCTTTTTAACAGTAAAATATGAACAGCAATCTTTGTAATAAGCAGAACCacacattgaaaaaaaaaaaaggacatcAACTCTTTTTCATTTCAGTGTTCATGTTATGCCTGTTTAAAcatattttacttgaattatatgttaaaatatgactccatttttttatatgatgttttGCCTTGGAATTTTTATAGACAAATATAGTGCTCCAAATTATGGATGAACCTTTGATAATGGCACCATGATTCAATGAAAACTAGATGCTTCTTTTCTGAATTTACGTAACCTTTGTTACGCCGAACACCATACGAAGTTATTGAAGTTAATGGTTGATATGTCAATTTAAAATTGATACATAAGAACTGTGTTAATCAATAAACTTAGTACAGAGTATATTTACGGCTGTTCGAAAGAGTATGTGTATTGTTTGGGTTTGATGCATACTTCCTCAAAATTTACAAGCAAATCTTGGTTCTTTGGGTATTAAAAAAcataagatctatgttaatttagaaatttaatattaaggCATGAATAAAGTTGACAAATTGGTAAGACCATTCCTTGAAATCACTTGTGCTTTTGTTGATGTAAAACTTACAGTGGTGTCCGGGGATGATGATACAAAAACTGTGATTAAAGGGATAGATCATGGTGCTTGTGATTATCTTTTAAAGCCTGTTAGGATCCAAGAGCTCAGAACTATATGGAAACATATCCTGAGGAAGGAGAAGGTAAACAAGGCATCTGCAAAAGATCCTGACAATGCAATGTCTGATTCAAGTACCAAAAATGTGGAAGGAAGGAAAAGAAAGGGGCGGGACGGGGAAGAAGGAGATGAAGGAGATACAGAGGAGCCTAAGAAGAAGACAAGAATGATTTGGACCCAAGAACTTCAATCCAAATTCATCAAAGCTATTGTTACTCTTGGAGCATATAGTATGTTTTTTTATTCAAGTCAATAGAAAATTTATTAATTCACTAGCATTGAATGAGTACCTACATGTGTTTACATTTGGATCTTTTGAACAAAGCTCCTCTTTAAGTAGCTGAAGTTACGCTGTTTTTGTGCATACCTGACTGGATCACTGTCAGGTGATCCATAGTTTTCAGAGCCGACGATTGTAAttccatgaaattttcttactgttttttttttttttttttaaattaaaattaaaatgcagAAGCTGTTCCAGCAAAGATCCTCGAATTCATGAGAGTTGAAGGGCTAACAAGAGAACACGTGGCAAGCCATCTTCAGGCAAGTTTTAGTAAACTATTTAATAGCTTGCAGCATTACTTGTGCCGTTGGATCAACGATACTAGAATACATACTGGTAGTTTCTTAGAAACTTGA

Functional annotation

Database	accession number	e-value	annotation
nr	XP_031121250.1	2.9e-51	two-component response regulator ORR22-like isoform X1
Swissprot	B8B3I4.1	2.8e-51	Two-component response regulator ORR22
trEMBL	A0A8J5LVA6	1.3e-53	Two-component response regulator

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT4G31920.1	50.00	2e-55	212	ARR10;RR10	response regulator 10

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
Asa5G02216	AT4G31920.1	220	101	2	17	231	17	232	50.00	2e-55	212
Asa5G02216	AT4G16110.1	245	100	6	12	231	24	265	47.76	4e-55	211
Asa5G02216	AT2G25180.1	228	102	4	17	231	17	244	49.56	1e-54	209

Ortholog group

Species	Genes
Allium cepa	g519560.t1; g99831.t1
Allium fistulosum	AfisC2G02115
Allium sativum	Asa0G01969.1; Asa5G02216.1; Asa5G06070.1
Arabidopsis thaliana
Oryza sativa

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00072.21	Response_reg	Domain	19	128	81.5	4.3e-23

Gene Ontology

Accession	Ontology	Name
GO:0000156	F	phosphorelay response regulator activity
GO:0000160	P	phosphorelay signal transduction system
GO:0003682	F	chromatin binding
GO:0006355	P	regulation of transcription, DNA-templated

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K14491	ARR-B; two-component response regulator ARR-B family	EC:-	Plant hormone signal transduction	ko04075

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network