result

Gene information

Detail information of Asa5G02375

Location

Gene	Chr	Start	End	Strand
Asa5G02375	chr5	608222882	608224557	+

Sequences

CDS

Protein

Gene

>Asa5G02375.1
ATGTGTCCTACTCCGCCTCTTCTATCGGCCGATTCGTCGGATGAATTTGTTGTGACGTTTCTGGATTCGAGGAGCGTTGATGATCCGGTGCCATCTAATGTGATTACCGGCGTCGATCCATTCACTATCGACCCTCGACTCTCTTCaggtttctatttttaaaattataactaaGCTAGCTTTTACGGATGAGTTTGGACCGGTATTAAACTAATTTGAACTGGGCAATCCCAATTTGGGAACTGTGTCATTTTGGTTTGAAGTACAACACTATTATTAATCGATTATTACCTGCTTTTCTACTCTGAAATGGTTGTTTCTTGTAATACTTTTAGAAAGTAGAAACATAATCCAGTGACTAATTATTATACTGGTTTCCTATTTTGTGATTCTGTATCCATTGCGGAGCTTTATGCTAACCAAAAGTTGAGAATCATTCATGTTTAGATCTTCAGCTAGAATCCTTGTCGTTTCCTTGATGAGTGATAACGACACATGCTTTGTATTTGGATATACGATCTTTTTTCCTTTACCTTTTGGTCAGTATATTCTTCTTTGAATGCTTACTTGTAATAAGAAGCATTAATAATGGAAGGATTTTTGGTGCAATTGACAAGCAATTTCACACTTAACGTATCCTGATTGAATATTTGATCATGGTTTGTAATTATGGGAGTTTTGCTTTGCAGTTGTGAGAAGTTTGGCTATATTAGCATGACATGACATGAAAATATACTGTGGTACAATTATTTTTGAACCGTGCTTTGCCCTTTGAATTTATATACATTGGTCGGTcaatttttgattgatttattcttattcttcACAAGATTTGAAGTCAATAATGCACTGTTACTTCAATTTGACGACTTTAAAGTGTTTTTTATTTCTGCAACACAGGTGATAATTGGTATATGCACAAGTCAATTATTTTAGACATTGTTGATGAGCGTAGTGTGACTAAAGGGAATAGTGGGAATTGGGAGTTTATGAGTAACATTGGTATATCCATGCCTTGCAGTACGCATAGTATAATTGGAAGGAAAATTACTAGAAATTTTTTCTTGGACAATGGAACTTGTGTGGATAAAACCACATTTGGGATGCATGAATATTTAGTAGAACAAGAGAAAAACAAATTCAAGGTACTCTTACCTACGTTTGCTGCTAACTTATTTATTAGTTCTTTAATTGATTGCCTTTGTCTAATAAATAGGAAACAAGATTGTCTAGAATCTTCTCACAAATAGTTGAGgtgaaaaatgaagaagaaagcaTCACTGGTAGTGAGAACTCAGAGTTAAAGTTGCCATTTTTGGTAAATCAGCAAGAAAGAACTCAGGGTTCATTGTAATCAAAAGGAGAATATCACTCTATTTTTGTTGgactttatttttttaattttatttctttaggGGAGTAATGGAATAGAGGGGCAACTGGAATTACCAAACGATATGATGAATGAGGAAGCTGGACTTGAAGACTTCattgaattgaaagatttatttgATCCAGAAGATGGAAACTCGTCCTTTTCGGGTAATACTAGCATGAAGTCAATGACTTCAGATGAGAACTTTGAATCGGAAATCATGGGATTTGATGCAGAAGCCATGATCAGTGATATAGCTAATGATGTAACCAATGCGAATGCATCAGTTAgctgtaattaa

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020242206.1	2.6e-20	protein ATAF2-like
trEMBL	A0A8B8ZSB5	8.0e-16	NAC domain-containing protein JA2-like

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
-	-	-	-	-	-

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
-	-	-	-	-	-	-	-	-	-	-	-

Ortholog group

Species	Genes
Allium cepa	g104440.t1; g314036.t1; g314087.t1; g538121.t1; g60152.t1
Allium fistulosum	AfisC1G03081; AfisC2G02456; AfisC2G02459; AfisC2G02462; AfisC2G04834; AfisC2G07932; AfisC3G00217; AfisC3G04516; AfisC4G04228; AfisC7G02427; AfisC8G03693
Allium sativum	Asa0G04200.1; Asa5G02353.1; Asa5G02355.1; Asa5G02359.1; Asa5G02360.1; Asa5G02366.1; Asa5G02375.1; Asa5G02378.1; Asa5G02379.1
Arabidopsis thaliana
Oryza sativa

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
-	-	-	-	-	-	-

Gene Ontology

Accession	Ontology	Name
GO:0003677	F	DNA binding
GO:0006355	P	regulation of transcription, DNA-templated

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network