result

Gene information

Detail information of Asa5G03206

Location

Gene	Chr	Start	End	Strand
Asa5G03206	chr5	824431895	824433555	+

Sequences

CDS

>Asa5G03206.1
ATGTCCCCCGCTAATATTATATTCTTAACATCACAGAGTACTGATTTGAGCACGTACGGAAACAGGTCTTTGCAGCTGAAAGTACAGAAACTAAAAGAAGAACGAGAAACCGGATCGGAATTGGATACAAAGGAAGAAGAACCTGAAGGCAAAAAAGGGATTGTCGGGAAAGTGATCTCCGACGAAGATTCCGGCAGGTCGTGCAAAGAGTCCAACAGCACGGATGATACAAAGAACACGCCGGACGTTAAGGCGTACGACAAGGTTACGGTCGATTCGAATCGGGATCTTATTAGGTCAAGATCCGGATCCATTAACGCGAATCGAAATCGAAACGAGAACGAGTCCAGCAGCGATGTGCAAAGTTCGCTTTGCCGGAGGCGAGAAGGTGGCAGCGGCTCAACGTCGGTATCGATCGTCAAAAAGAGGAATGAGGTTGAGGTTGAGGTTGAATCTCGGCCGCTGATTGCCTTTTTAGAAATTATCAAGTCCAGTAAAGATGGACTGGTTTTTGATGAACGGCTTGAGAGCCAGGAAACCCCACTATACAAAAACACAATACGCCGCCACGTGGATCTGAAAACAATCCAAAACCGAATTGGGACCGTTGGATATAAACGACTAGAGTTCTTCCGTGATCTGCTGCTCCTTTGCAACAACGCAATAGTGTTCTATCCTAGAAACTCAGCAGAGGCAATCTCAGCCGTCCGTTTACGCGCCTTGGTCAAAAAAGAAATGACCTCCAAATTGCGCAAAGCCCCTAAACATTCTCCGCAATCGCAGAAGGAACCAACCAGGCCGAAGGTCATTCCGGTCCAGCACCAGAAAACAGCCATGCCGGCAGCACCATTGGTGGCATGTTCTAAACGGGGCTCGACTAAACCCGTTAAGAAGGAAGAATCGGAAACTACAGAGAACGGTAAGGAAAAGAAAGAGATCCCCAAGCAGAGGAAATCAAGAGGACCACGGACTTTCAAAGGGCGAGGGAAGAAAGCGGGACCGGGGATGAACCCGAAACCCGAAGGCGAAATAACAGAGCAAGGAGTGAAGGTGGGTAACACAAAGAAGAGAGGGATGGGCTTTTTGAACAGGATGAAGAGCGGACCTGGTACTACTGATGAGAACGTGGGGGTGAATGGTAAAAACGGTGGTCGTAAGAAGAAGGGAAGAGAGGAGGGTAGAAAGAAAGAGGTGGGTGTGAAAAGAAACGTAGGGAGGCCGCCGAAGAGAGGGGTGAAGAGAGGGAGGGAGGAGGATAAGGCGGAGTCGCCTGTGAGAAGAAAGAGGGGGAGGGGGTGA

Protein

Gene

>Asa5G03206.1
ATGTCCCCCGCTAATATTATATTCTTAACATCACAGAGTACTGATTTGAGCACGTACGGAAACAGGTCTTTGCAGCTGAAAGTACAGAAACTAAAAGAAGAACGAGAAACCGGATCGGAATTGGATACAAAGGAAGAAGAACCTGAAGGCAAAAAAGGGATTGTCGGGAAAGTGATCTCCGACGAAGATTCCGGCAGGTCGTGCAAAGAGTCCAACAGCACGGATGATACAAAGAACACGCCGGACGTTAAGGCGTACGACAAGGTTACGGTCGATTCGAATCGGGATCTTATTAGGTCAAGATCCGGATCCATTAACGCGAATCGAAATCGAAACGAGAACGAGTCCAGCAGCGATGTGCAAAGTTCGCTTTGCCGGAGGCGAGAAGGTGGCAGCGGCTCAACGTCGGTATCGATCGTCAAAAAGAGGAATGAGGTTGAGGTTGAGGTTGAATCTCGGCCGCTGATTGCCTTTTTAGAAATTATCAAGTCCAGTAAAGATGGACTGGTTTTTGATGAACGGCTTGAGAGCCAGGTATTGTTCTTCGAGGGTCCGTTTGCACCGTTTGATTGCATACGATTCTGAAGTGGACGGTTCTTtaaagaaattattattatattataattttgaaggTTTTGCGGTTATTTATTGAAATATTTCTTAACTGCATAATTCGTAATACAAAATTAAAGATTAACTTCGTAATGTTATTATAAACATTTTAAGCGTATTAGTTCTAGCACGAGCCTAGCGTGATTTGACTAAATTCGAAACTAGTTTTGAAGCTACAATTTCCAGATTACAAACTTCTAATTAATTAATCAGGAAAATAGTGTGggaaacatgttttattttcataattgtaagaataaataattattttgcaTTATTCGCAGGAAACCCCACTATACAAAAACACAATACGCCGCCACGTGGATCTGAAAACAATCCAAAACCGAATTGGGACCGTTGGATATAAACGACTAGAGTTCTTCCGTGATCTGCTGCTCCTTTGCAACAACGCAATAGTGTTCTATCCTAGAAACTCAGCAGAGGCAATCTCAGCCGTCCGTTTACGCGCCTTGGTCAAAAAAGAAATGACCTCCAAATTGCGCAAAGCCCCTAAACATTCTCCGCAATCGCAGAAGGAACCAACCAGGCCGAAGGTCATTCCGGTCCAGCACCAGAAAACAGCCATGCCGGCAGCACCATTGGTGGCATGTTCTAAACGGGGCTCGACTAAACCCGTTAAGAAGGAAGAATCGGAAACTACAGAGAACGGTaaggaaaagaaagagatcccCAAGCAGAGGAAATCAAGAGGACCACGGACTTTCAAAGGGCGAGGGAAGAAAGCGGGACCGGGGATGAACCCGAAACCCGAAGGCGAAATAACAGAGCAAGGAGTGAAGGTGGGTAACACAAAGAAGAGAGGGATGGGCTTTTTGAACAGGATGAAGAGCGGACCTGGTACTACTGATGAGAACGTGGGGGTGAATGGTAAAAACGGTGGTCgtaagaagaagggaagagaggaGGGTAGAAAGAAAGAGGTGGGTGTGAAAAGAAACGTAGGGAGGCCGCCGAAGAGAGGGGTGAAGAGAGGGAGGGAGGAGGATAAGGCGGAGTCGCCTGTGAGAAGAAAGAGGGGGAGGGGGTGA

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020266953.1	4.1e-34	LOW QUALITY PROTEIN: uncharacterized protein LOC109842496
trEMBL	A0A5P1EW71	6.8e-23	Bromo domain-containing protein

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT2G42150.1	39.55	6e-26	115		DNA-binding bromodomain-containing protein

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
Asa5G03206	AT2G42150.1	268	132	9	35	291	170	418	39.55	6e-26	115
Asa5G03206	AT3G57980.1	315	159	11	148	408	271	584	32.06	4e-23	106
Asa5G03206	AT2G44430.1	171	96	3	126	290	293	453	34.50	1e-22	104

Ortholog group

Species	Genes
Allium cepa	g215233.t1; g237343.t1
Allium fistulosum	AfisC4G04714; AfisC5G05582
Allium sativum	Asa5G03205.1; Asa5G03206.1; Asa5G04008.1; Asa6G05505.1; Asa6G05506.1
Arabidopsis thaliana	AT2G42150.1; AT2G44430.1; AT3G57980.1; AT3G60110.1
Oryza sativa	LOC_Os08g39980.1

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00439.22	Bromodomain	Domain	163	235	36.1	4.7e-09

Gene Ontology

Accession	Ontology	Name
GO:0005515	F	protein binding

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K11321	BRD8; bromodomain-containing protein 8	EC:-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network