Detail information of Asa5G04105
| Gene | Chr | Start | End | Strand |
|---|
| Asa5G04105 | chr5 | 1094997633 | 1095010417 | - |
| Database | accession number | e-value | annotation |
|---|
| nr | XP_020265853.1 | 8.7e-41 | probable small nuclear ribonucleoprotein F isoform X1 |
| Swissprot | Q9SUM2.1 | 1.2e-39 | Sm protein F |
| trEMBL | A0A5P1EWT9 | 6.3e-41 | Sm protein F |
| TAIR id | % identity | e-value | bit
score | gene aliases | Short description |
|---|
| AT4G30220.2 | 89.41 | 1e-40 | 163 | RUXF | small nuclear ribonucleoprotein F |
>>>Show top 3 blast result 
| Query id | Subject id | alignment
length | mis
matches | gap openings | query
start | query
end | subject
start | subject
end | % identity | e-value | bit
score |
|---|
| Asa5G04105 | AT4G30220.2 | 85 | 9 | 0 | 202 | 286 | 10 | 94 | 89.41 | 1e-40 | 163 |
| Asa5G04105 | AT4G30220.1 | 84 | 8 | 0 | 203 | 286 | 3 | 86 | 90.48 | 2e-40 | 162 |
| Asa5G04105 | AT2G14285.1 | 59 | 5 | 0 | 228 | 286 | 1 | 59 | 91.53 | 2e-26 | 116 |
| Pfam ID | Pfam name | type | alignment_start | alignment_end | bit_score | Evalue |
|---|
| PF01423.19 | LSM | Domain | 211 | 273 | 67.8 | 4.4e-19 |
| KO | Name | Enzyme ID | Pathway | Pathway ID |
|---|
| K11098 | SNRPF, SMF; small nuclear ribonucleoprotein F | EC:- | Spliceosome | ko03040 |