Detail information of Asa5G04479


Location
GeneChrStartEndStrand
Asa5G04479chr512134089191213415506+



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_020253118.11.1e-22RNA polymerase II transcriptional coactivator KIWI-like
SwissprotO65154.11.7e-20RNA polymerase II transcriptional coactivator KIWI
trEMBLA0A1U8AZT21.0e-22RNA polymerase II transcriptional coactivator KIWI-like isoform X1

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT5G09250.152.275e-2299.0KIWIssDNA-binding transcriptional regulator

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag355405.t1; g407659.t1; g407660.t1
Allium fistulosumAfisC2G03645; AfisC4G05376; AfisC6G06591
Allium sativumAsa0G00431.1; Asa5G04479.1; Asa6G01326.1; Asa6G03987.1
Arabidopsis thalianaAT5G09240.1; AT5G09240.2; AT5G09250.1; AT5G09250.2
Oryza sativaLOC_Os02g34840.1

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF02229.13PC4Domain388987.92.3e-25

Gene Ontology
AccessionOntologyName
GO:0003677FDNA binding
GO:0003713Ftranscription coactivator activity
GO:0006355Pregulation of transcription, DNA-templated

KEGG pathway
KONameEnzyme IDPathwayPathway ID
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Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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