result

Gene information

Detail information of Asa5G04821

Location

Gene	Chr	Start	End	Strand
Asa5G04821	chr5	1314530908	1314532830	+

Sequences

CDS

>Asa5G04821.1
ATGGAGAAACAAAATATTATAATCCTTTTCACAATTTTCATCTCACTTCTCTCATCTTCAACCTCCCAACAGCCATACGAAAGAAGCAACCCACAACTCCTATGCGACGTCGACGGAGTCTCCACGGCCGGCTACAGTTGCGACCTTTCCAACTCCGACCCTCAAACCTGCAACTCCTTCTTATCATTCCGCTCCCAAACAAATTATCAAACGCCCCTCCAAATCTCAAACCTCTTAAACTCAAACCCTTCTTCAATAGCCAAACTCAACGAATCCCCTTCCAACAATTCAACCATACCCCTCAACAATATAGTCCTGATTCCAACCACCTGCAACTGTAGCAACGGATTCTACCAGCATAACGCTAACTACGTCGTCCGTATTCAAGGTGAGACTTACTTAACCATCGCTAATGACACTTATCAGGGCTTAACCACTTGTCAAGCTTTGATCAGTCAGAATAGGATCAAAGAAAGACAGATTTTCGCTGGAAATAATACCTTAATTCCATTAAGGTGCGCATGCCCAACCAAGAATCAAACCGAGCTTGGATTTAAATTCTTGCTAACTTACTTAATCACCTGGTATGATAACGTGCATGCCATCTCTCAGAAGTTTGGTGTTGATTCCAGTGCTGTTTTAGCTGTTAATGGGTTATCCGATTCTGATACCATTTACCCGTTTACCACACTTTTGATCCCTATGAAGAAAGAACCTACTGTAGCTCAGATATCTTCACCACCTCTGTCTGCTCCAAGCCCCTCAGGTACTGCTCCAGACACCCCAGCGCCATCTGGTGGTGCCTCTAGTAAGAAATGGGTAGCTGTTGGAGTCTCAGTCGGTGTGGTTTTTCTTATCTTGCTTGCTTTAACAAGCTGGTATTGGTGTGCACGTAAAATGCACGGTGAATTACCAACTGACATTGGAAGTAAAATAAAAGCTGCGGACAATTCGACTAAGTATGGTACTTCATCTAGTTTTGTGTCAAGCGAGGTCCGTAACTTCATCGAGTCACTAATGGTGTACAAATTTGGAGAATTGGAGAAAGCTACCAATTACTTTGGTGAAGAGTCTAGGATAAAAGGCTCGGTGTACCGAGCAGTGATCAATAAAGACCAAGCTGCAGTTAAAAGGCTGAAAGGCGACGTGTCGAACGAGATAAAGATACTCAAACAAATCAACCATTCCAACATAATTAGACTATCGGGCTTTTGCGTGCATGAAGGTGACACTTATTTTGTATATGAATTTGCAGAAAATGGTTCTCTCGCTGACTGGATTCATGGTGAGAAAGACTTAAGTTGGAGACAACGAGTTGTGGTTGCTTATGACATAGCTGATGGGTTGAACTATTTGCACAACTACACGAACCCACCATACATACATAAGAACTTGAAGAGCAGTAACATATTGATGGATGGTGAGTTTAGAGGGAAGATATCGAATTTTGGATTGGCTAGAAGGTACGAGGAGTACGAGGAAATGGCTCAATTGACAAGGCATGTGGTGGGTACACAAGGGTACATGGCACCCGAGTATTTGGAGCATGGGCTTATAACACCAAAGCTCGACGTGTTTGCCTTTGGAGTTGTGTTACTGGAGCTTTTATCGGGTAAAGAAGCTACTTATAAGGACGGTGAGGACAAAGAAGTAATGTTGTGGGTGGAGATAGGGAAAGTGATGAATGGAGAAGATAAGAAGAGTGGTTTGAAAGAGTTTATGGATCCTTCACTGGAGAATGATTATGGCTTGGATTTGGCTTTTGCAATGGCGGAACTAGCGGGTAGATGTGTGAGTAAGGAAGCGGGTTCTAGACCGGCTATGGCAGAGGTGTTTATGTCTCTTTCGGCCATTTATAATTCGACGTTGGAGTGGGATCCTTCAAATGTTGGGAATTCAGGATCAATGATTCATGGAAGGTAG

Protein

Gene

>Asa5G04821.1
ATGgagaaacaaaatattataatcctTTTCACAATTTTCATCTCACTTCTCTCATCTTCAACCTCCCAACAGCCATACGAAAGAAGCAACCCACAACTCCTATGCGACGTCGACGGAGTCTCCACGGCCGGCTACAGTTGCGACCTTTCCAACTCCGACCCTCAAACCTGCAACTCCTTCTTATCATTCCGCTCCCAAACAAATTATCAAACGCCCCTCCAAATCTCAAACCTCTTAAACTCAAACCCTTCTTCAATAGCCAAACTCAACGAATCCCCTTCCAACAATTCAACCATACCCCTCAACAATATAGTCCTGATTCCAACCACCTGCAACTGTAGCAACGGATTCTACCAGCATAACGCTAACTACGTCGTCCGTATTCAAGGTGAGACTTACTTAACCATCGCTAATGACACTTATCAGGGCTTAACCACTTGTCAAGCTTTGATCAGTCAGAATAGGATCAAAGAAAGACAGATTTTCGCTGGAAATAATACCTTAATTCCATTAAGGTGCGCATGCCCAACCAAGAATCAAACCGAGCTTGGATTTAAATTCTTGCTAACTTACTTAATCACCTGGTATGATAACGTGCATGCCATCTCTCAGAAGTTTGGTGTTGATTCCAGTGCTGTTTTAGCTGTTAATGGGTTATCCGATTCTGATACCATTTACCCGTTTACCACACTTTTGATCCCTATGAAGAAAGAACCTACTGTAGCTCAGATATCTTCACCACCTCTGTCTGCTCCAAGCCCCTCAGGTACTGCTCCAGACACCCCAGCGCCATCTGGTGGTGCCTCTAGTAAGAAATGGGTAGCTGTTGGAGTCTCAGTCGGTGTGGTTTTTCTTATCTTGCTTGCTTTAACAAGCTGGTATTGGTGTGCACGTAAAATGCACGGTGAATTACCAACTGACATTGGAAGTAAAATAAAAGCTGCGGACAATTCGACTAAGTATGGTACTTCATCTAGTTTTGTGTCAAGCGAGGTCCGTAACTTCATCGAGTCACTAATGGTGTACAAATTTGGAGAATTGGAGAAAGCTACCAATTACTTTGGTGAAGAGTCTAGGATAAAAGGCTCGGTGTACCGAGCAGTGATCAATAAAGACCAAGCTGCAGTTAAAAGGCTGAAAGGCGACGTGTCGAACGAGATAAAGATACTCAAACAAATCAACCATTCCAACATAATTAGACTATCGGGCTTTTGCGTGCATGAAGGTGACACTTATTTTGTATATGAATTTGCAGAAAATGGTTCTCTCGCTGACTGGATTCATGGTGAGAAAGACTTAAGTTGGAGACAACGAGTTGTGGTTGCTTATGACATAGCTGATGGGTTGAACTATTTGCACAACTACACGAACCCACCATACATACATAAGAACTTGAAGAGCAGTAACATATTGATGGATGGTGAGTTTAGAGGGAAGATATCGAATTTTGGATTGGCTAGAAGGTACGAGGAGTACGAGGAAATGGCTCAATTGACAAGGCATGTGGTGGGTACACAAGGGTACATGGCACCCGAGTATTTGGAGCATGGGCTTATAACACCAAAGCTCGACGTGTTTGCCTTTGGAGTTGTGTTACTGGAGCTTTTATCGGGTAAAGAAGCTACTTATAAGGACGGTGAGGACAAAGAAGTAATGTTGTGGGTGGAGATAGGGAAAGTGATGAATGGAGAAGATAAGAAGAGTGGTTTGAAAGAGTTTATGGATCCTTCACTGGAGAATGATTATGGCTTGGATTTGGCTTTTGCAATGGCGGAACTAGCGGGTAGATGTGTGAGTAAGGAAGCGGGTTCTAGACCGGCTATGGCAGAGGTGTTTATGTCTCTTTCGGCCATTTATAATTCGACGTTGGAGTGGGATCCTTCAAATGTTGGGAATTCAGGATCAATGATTCATGGAAGGTAG

Functional annotation

Database	accession number	e-value	annotation
nr	XP_010913816.1	3.1e-187	protein LYK5-like
Swissprot	O22808.1	1.5e-146	LysM-containing receptor-like kinase 5
trEMBL	A0A6I9QT82	2.2e-187	protein LYK5-like

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT2G33580.1	46.44	6e-153	538	LYK5	Protein kinase superfamily protein

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
Asa5G04821	AT2G33580.1	661	314	15	7	636	11	662	46.44	6e-153	538
Asa5G04821	AT2G23770.1	636	336	13	8	629	8	611	39.94	3e-111	399
Asa5G04821	AT3G21630.1	591	340	21	79	640	61	617	31.81	2e-67	253

Ortholog group

Species	Genes
Allium cepa	g352868.t1; g54893.t1; g9314.t1
Allium fistulosum	AfisC4G05827; AfisC4G05836; AfisS1139G00001
Allium sativum	Asa5G04820.1; Asa5G04821.1
Arabidopsis thaliana	AT2G33580.1
Oryza sativa	LOC_Os02g09960.1; LOC_Os06g41980.1

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF01476.17	LysM	Domain	197	234	16.5	0.0062
PF00069.22	Pkinase	Domain	370	611	141.5	2.8e-41

Gene Ontology

Accession	Ontology	Name
GO:0004672	F	protein kinase activity
GO:0004713	F	protein tyrosine kinase activity
GO:0005524	F	ATP binding
GO:0006468	P	protein phosphorylation
GO:0016998	P	cell wall macromolecule catabolic process

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K04730	IRAK1; interleukin-1 receptor-associated kinase 1	EC:2.7.11.1	MAPK signaling pathway	ko04010
			NF-kappa B signaling pathway	ko04064
			Toll-like receptor signaling pathway	ko04620
			Toll and Imd signaling pathway	ko04624
			Neurotrophin signaling pathway	ko04722

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network