result

Gene information

Detail information of Asa5G06070

Location

Gene	Chr	Start	End	Strand
Asa5G06070	chr5	1663759413	1663761308	-

Sequences

CDS

Protein

Gene

>Asa5G06070.1
ATGGCTGATTGTGCAGCAATGGCTGACCAAGCTTTCCCAGATCGTCAGCTGACTATTCTGTCAGTTGATGACAGCTTAGTTTGCCTGAGAATCTTGGAAGCTAAACTGCTCCAGTGTAAATATCATGGTttgttaaatttatttcattttttaattttatttttataccgaTTTTTAGGACACTTCTTAATTGTCACTAATCAGATTAAGTTTATTATGTTACTGAAATTTACTGCTTTGATCATTGAATGGAAagatgcaaatataaaaataatcaatgcATGTAGTATCATTAACTTTTACTTAACATTGTTGTGATTTACCATGCATGATTATAATTTAGTTGTATATGTATCATTTTGCAGTGATATCAACCAGTTCAGCTGCTGAAGCATTGAGCATCCTGAGAGCAAAAGAtcccaaatttgatattattattacggATGTTCATATGCCTGGCATGGATGGGTTTGAGCTACTGAAGCAAGTAGGTCTGGAAATGGACCTTCCATGCATTAGTAAGTCGTTGACTTTATTTTAGTTAGGGCTTGATATCAACTTTTTTTAACAGTAAAATATGAACAGCAATCTTTGTAATTAGCAGAACCACacataaaaaaaaaacatcaactcttttttatttcaatgttcatgtTATGGCTGTTTAAAcatattttacttgaattatatgttaaaatatgactccatttttttatatgatgttttGCCTTGGAATTTTTATAGACAAATATAGTGCTCCAAATTATGGATGAACCTTTGATAATGGCACCATGATTCAATGAAAACTAGATGCTTCTTTTCTGAATTTATGTAACCTTTGTTACGCTGAACGCCATACGAAGTTATTGAAGTTAATGGTTGATATGTCAATTTAAAATTGATACATAAGAACTGTGTTAATCAATAAACTTAGTACAGAGTATATTTATGGCTGTTCGAAAGAGTATGTGTATTGTTTGGGTTTGATGCATACTTCCTCAAAATTTACAAGCAAATCTTGGTTCTTTGGGTATTAAAAAACATAATAtctatgttaatttagaaatttaatattaaggCATGAATAAAGTTGACAATTGGTAAGTCCATTCCTTGAAATCACTTGTGCTTTTGTTGATGTAAAACTTACAGTGGTGTCCGGGGATGATGATATAAAAACTGTGATTAAAGGGATAGATCATGGTGCTTGTGATTATCTTTTAAAGCCTGTTAGGATCCAAGAGCTCAGAACTATATGGAAACATATCCTGAGAAAGGAGAAGGTAAACAAGGCATCTGCAAAAGATTCTGGCAATGCAATGTCTGATTCAAGTACCAAAAATGTGGAAGGAAGGAAAAGAAAGGGACGGGACGGGgaggaaggagatgaaggagaTACAGAGGAGCCCAAGAAGAAGACAAGAATGATTTGGACCCAAGAACTTCAATCCAAATTCATCAAAGCTATTGTTACTCTTGGAGCATATAGTATGTTTTTTATTCAAGTCAATAGCAAATTTATTAATTCACTAGCATTGAATGAGTACCTAAACGTGTTTACATTTGGATCTTTTGAACAAAGCTCCTCTTTAAGCAGCTGAAGTTACGCTGTTTTTGTGTATACCTGACTGGATCACTGTCAGGTGATCCATAGTTTTCAGAGCCGACGATTGTAAttccatgaaattttcttacttttttttttttttttttttaaatgcagaaGCTGTTCCAGCAAAGATCCTCGAATTCATGAGAGTTGAAGGGCTAACAAGAGAACACGTGGCAAGCCATCTTCAGGCAAGTTTTAGTAAACTATTTAATAGCTTGCAGCATTACTTGTGCCGTTGGATCAACGATACTAGAATACATACTGGTAGTTTCTTAGAAACTTGA

Functional annotation

Database	accession number	e-value	annotation
nr	XP_019170923.1	3.2e-50	PREDICTED: two-component response regulator ORR22-like isoform X2
Swissprot	Q6K8X6.1	7.0e-50	OsRRB5
trEMBL	D8T138	2.3e-50	Uncharacterized protein RR4-2

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT4G31920.1	49.54	3e-56	215	ARR10;RR10	response regulator 10

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
Asa5G06070	AT4G31920.1	216	108	1	17	231	17	232	49.54	3e-56	215
Asa5G06070	AT4G16110.1	243	104	4	12	231	24	265	47.33	1e-55	213
Asa5G06070	AT2G25180.1	228	100	5	17	231	17	244	50.44	3e-55	211

Ortholog group

Species	Genes
Allium cepa	g519560.t1; g99831.t1
Allium fistulosum	AfisC2G02115
Allium sativum	Asa0G01969.1; Asa5G02216.1; Asa5G06070.1
Arabidopsis thaliana
Oryza sativa

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00072.21	Response_reg	Domain	19	128	80.4	9.1e-23

Gene Ontology

Accession	Ontology	Name
GO:0000156	F	phosphorelay response regulator activity
GO:0000160	P	phosphorelay signal transduction system
GO:0003682	F	chromatin binding
GO:0006355	P	regulation of transcription, DNA-templated

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K14491	ARR-B; two-component response regulator ARR-B family	EC:-	Plant hormone signal transduction	ko04075

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network