result

Gene information

Detail information of Asa6G00015

Location

Gene	Chr	Start	End	Strand
Asa6G00015	chr6	4970328	4972622	-

Sequences

CDS

Protein

Gene

>Asa6G00015.1
ATGCATGCCAGGAGCAAGCTTTGCAAGTTGCGGAATTGTGCTGAAACTGAGATGCAGAACATAATAACAGTAAGCATGAATTCGAGCTACATATAGTTTGCATTTGTTTCTTTCTGTTTTACTTTGAAGCTCTTTGTGTATTGcactttttttttcaataatcAAAAGTACTTTTTTTTAACATTCAAAAGTATGCATACACGTTTGTTATGTCAAAGAAGACTCTTTACATTTATCCAAACATGtctattgtaaaaaaaaatatgaactctACCACCTGATTGCTTTGATTAATCCATTTGGGTACATCGTATTTGCTATCCTTCACGAAATTTCTAGTGATTACTATGTTGATGCATGTaacatgattattaaaatttaCTAACGTAGTTTTTCAATTCATATGGTACTTACGTGGACCTctaatggttttcaaatattcgAAATCAGCCATTAACTTggtttaaaattgtatattttttgcATATTTTAATCTGCATACTCGTTGAATAATCAAAGTTATAGATGTGTGAGACGTGTATGTTGTTTTATGTGAGTCCGACATTTAGTTTTATCTTCAGTATTTTTGTTCCAGCAGTTTCAGTTTTTCAAATGACAGTGGtacttttaagtgatttatttaaataaattagtttattagttgggatttatttattacatcttatttttttattttttttatttcaattaaatgttcactgatataatgatatgttatgagtttatatttgtttcgtttctgtttttatttctttattttattagtcGTTTATAGTTGCAAAATAGTTAAACAATAAGATTACATTGATCCAACttggtatataataaaaatgcatgtatGTTTTTGTGACTAATTTGAATCAATACATTGGTAATATATTCTTGTCTCAaattggtttacatgtaaaatccAGTTTAATTGAATTTATGCTTTATTAGTTACTTTATTTCCTCTTAAATTAtcctataattttaaaataaaatctaatttgaaatatgttttaacaaataatttttgttttatattgaacaCTAACGGTCgatttttcccaccgttgtacagtaattcaaattgtaaattaataaacaaaaaaagAAGTGATAAAACCCATGCTTATAATAACatcgaacatcaaaataaacaCGAAGAGCGGCTACAACCACAATAAAGAGACATATGACATTGTTCCTTGTAGTAAAGGTAGTTCTACATGTAAACTTTATGCTATTACTTTATGACAACTCTTGATGCCATATGCAGCACGTCTCTGGATTGCTTGCCGGCGTTGTGGCTGCTATCATGTGTTTAATACATGGAAGGACAAAACTAAACAGGGCAAGGGAGACATGTTTCAAACAAAATGGAGGGTTGTTTCTTCAAGCACAGATTAATGCACATCAGTCTGTCGGTTCAGGATATTTTCCATAAAAAACATCTTAAAGGCAACAAACAATTTCGATGAAGGTAACATTAAAGGACGTGGAGGTCAGGGCACTTTTTACGAAGGACTCATTGACAACAGACACGTAGCTATAAAAAAGGCAGTCGTGATCAATGAAAAGAGGATGAAGGAATTCGTTAAAGAAATGTATATGCTATCTCTCATCAACCATAAAAGCATAGCCCAAATTTTGGGGTGTTGTTTGGAAGTTGAAGTTCCCATCTTGGTTTATGAGTTCGTCTCTGGAGGTACACTATACCAACGTATTCAACAAAAGAATCAAAGCATGTCATTGGGATTTCGCCTTCAGATCGCAATTGACTGTGCTTCCGCTCTCACTTACTTACATTATTATTCTTTGCCCCCAATCACTCACAGGGATATTAAATCTTCAAACATTCTACTAGACGAGAATAATATtgcaaaaatatcagattttggagCTTCAATGTTACCcctattggaaataaatgaaacagGCGTACCCGGTACTTATGGCTACTTAGATCCTGAGAGTTTATTAACAGGTCAACTGACCAAAAAAAGCGATGTGTATAGTTTTGCAGTTGTCTTTCTAGAGCTTTTAACTAGAATGAAAGCAGTGTATTTTGGTGAGCTCGGAGAAAAAGAATACATTATGGGAACGTTCAAAGAAGAAGGTCTTGAACGGATTTTAGACGATGAAATCAGGCATGTGATGACGAAAGAACAAGTAACCGAATTTTCAGAGCTTTTGAGCAACTGTCTAGAGGAAAATCTGAGTGAAAGACCAACAATGAAAAAAGTCTTGGTTTGGCTTCAAAGGATACAAAAGTTTGATCCAAAATTTTAG

Functional annotation

Database	accession number	e-value	annotation
nr	XP_008778066.2	8.7e-68	wall-associated receptor kinase 3-like
Swissprot	Q9LMN8.2	2.3e-57	Wall-associated receptor kinase 3
trEMBL	A0A1U8A4T1	2.6e-66	putative wall-associated receptor kinase-like 16

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT4G31100.1	45.00	4e-61	231		wall-associated kinase, putative

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
Asa6G00015	AT4G31100.1	280	143	4	24	292	440	719	45.00	4e-61	231
Asa6G00015	AT4G31110.1	280	145	4	24	292	449	728	44.29	9e-61	230
Asa6G00015	AT1G19390.1	279	144	4	24	292	447	725	44.80	2e-60	229

Ortholog group

Species	Genes
Allium cepa	g450069.t1
Allium fistulosum	AfisC1G08215; AfisC1G08221; AfisC4G03052; AfisC8G01761; AfisS72G00001
Allium sativum	Asa0G04436.1; Asa0G04437.1; Asa5G03353.1; Asa6G00013.1; Asa6G00014.1; Asa6G00015.1; Asa6G01753.1; Asa6G01754.1; Asa7G00276.1; Asa7G06624.1; Asa7G06630.1
Arabidopsis thaliana	AT1G22720.1
Oryza sativa

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00069.22	Pkinase	Domain	35	286	137.3	5.4e-40

Gene Ontology

Accession	Ontology	Name
GO:0004672	F	protein kinase activity
GO:0004713	F	protein tyrosine kinase activity
GO:0005524	F	ATP binding
GO:0006468	P	protein phosphorylation

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K04730	IRAK1; interleukin-1 receptor-associated kinase 1	EC:2.7.11.1	MAPK signaling pathway	ko04010
			NF-kappa B signaling pathway	ko04064
			Toll-like receptor signaling pathway	ko04620
			Toll and Imd signaling pathway	ko04624
			Neurotrophin signaling pathway	ko04722

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network