result

Gene information

Detail information of Asa6G00996

Location

Gene	Chr	Start	End	Strand
Asa6G00996	chr6	266910707	266912976	-

Sequences

CDS

>Asa6G00996.1
ATGGAGTCAAGCAAACCTGGCAACACGAAGCTGTGGCTACTCACATTTCTCTTCGTCTCATCCATAGTAGTGAATGTATATTTCTTCTACAACAACAGCTTCAGTTTGGCCAGTCCCTTCCTCGGACTATCCTGGACCACCAAGGCAGCCACTGAGGCTGAGATAGTTGCGGCCATTGACTGTTCAGAGCATGGAAGAGCTTATTTGGATGGAGTGCCTGTCAATGGTGTTCCAATGTGCGAGTGCCATAATTGTTACAGTGGTCCCAGCTGCTCCGTATTGGCTTCAAATTGCACGGCTGATGCAACAACTGGCGATGCAATGTTTCTAGAGAAGTACTGGCTTCATCACAGAATAAACACAGCAGTTTTGGAATCTGGGTGGCACAGAATGAGCTACTTTATTGGTCATAATTTCATGTCCGATGAGCTAGACAAACATATTAGACTTCTACATAAAGCAGTAGGCAATGCCAAAGTTGATGATAAATTTCTGGTGTTCGGTAATGGAGTGACTCAACTTCTTAACGGAGTTATCATCTCCCTATCACCAAATGTTACAGCTACACCAGCTGCCCCCATAAAAAAAGTTGTTGCTTACGTTCCTTATTATCCAGTGTTCAAAAGCCAGACCAAATTTTTTAACTTCAGAGGATATGAATGGAAAGGAAATGCATCAGATTATGTTAATGCACCAAACCCCAAAGATTACATAGAGCTTGTGACTTCCCCAAACAACCCTGAAGGGCTGCTCCGTAAGTCCATAATTAAAGGTTCATTGGCTGTATATGATCATGCTACATATTGGCCTCATTATACTCCAATCAAATATACATCGGATGAAGACATCATGTTGTTTGCCCTCTCCAAGTACAGTGGACATTCTGGTAGTCGGTTTGGGTGGGCATTTGTAAGAGACAAGGCTGTGTATGATAAATTGACAACGTACATGGCAACAAACAGCGAGGGAGTATCGCGTGACACACAACTCAGAACACTGAAAATTATAAAAGAAATTGTGTTACAAATAAATCAACACAAGGGAACTGCTGGTGATTTCAATGAATATGGGTATACCACACTAAGAAACAGATGGATTAGACTAACCAATCTTGTAGCTCAGTCTAACCGATTCTCGCTTCAAAAACTATCTCCTGAATATTGCAATTACTTCAAAAGAGTCCGAGACCCTTCTCCAACATATGGATGGTTGAAGTGTGAATGGAAACAAGACACGGACTGCTCGGCTGTACTCCAGAATGGAAATATATTGACCCAAAGTGGAGTACGTTTTGAAGCAGGTAGTCGCTATGCACGTTTAAGTTTGATCAAGACACAAGATGATTTTAACCAACTGATGGAGCGTTTGAGTATTCTTGTAAAGGCTAAACAAACTAGTGCCTCTGAAGAGTACAATTACGAAATGGATCGAGAAAGATCAATCGAGCGTCCTTTCATCTACAGTGGTGATCAAGGGAGTTATGGGTCCTTCTAA

Protein

Gene

>Asa6G00996.1
ATGGAGTCAAGCAAACCTGGCAACACGAAGCTGTGGCTACTCACATTTCTCTTCGTCTCATCCATAGTAGTGAATGTAtatttcttctacaacaacagctTCAGTTTGGCCAGTCCCTTCCTCGGACTATCCTGGACCACCAAGGCAGCCACTGAGGCTGAGATAGTTGCGGCCATTGACTGTTcagagcatggaagagcttatttGGATGGAGTGCCTGTCAATGGTGTTCCAATGTGCGAGTGCCATAATTGTTACAGTGGTCCCAGCTGCTCCGTATTGGCTTCAAATTGCACGGCTGATGCAACAACGTAAGCACATCGCATCAgttatagttatatacatatataactaattATCCATTCACACTGAATACTGCATAAGGTGTTCACTATGATTGAAGCGTGACTTAATAAATTTCAATCGAACTATATGCCGAAGACACAGTTACCCACTAGGTCTAAGACTGGATCTTGAGATCAAACGTACTAGACCTCAAATCAGTAACCAAATAACCAAAGAAATAACCAAAGAAACAACCAAAACATACTTATGAAATGTACGTCATACGAATTTGCAATCTGCATAACAATTTTAATCTATATGTACATGCAGTGGCGATGCAATGTTTCTAGAGAAGTACTGGCTTCATCACAGAATAAACACAGCAGTTTTGGAATCTGGGTGGCACAGAATGAGCTACTTTATTGGTCATAATTTCATGTCCGATGAGCTAGACAAACATATTAGACTTCTACATAAAGCAGTAGGCAATGCCAAAGTTGATGATAAATTTCTGGTGTTCGGTAATGGAGTGACTCAACTTCTTAACGGAGTTATCATCTCCCTATCACCAAATGTTACAGCTACACCAGCTGCCCCCATAAAAAAAGTTGTTGCTTACGTTCCTTATTATCCAGTAAGTCTCCAGTAATACAAAGTACAATCAATTGCCAAATGTAGTATttataaccttttttttttttttttttgttgtttgtaAAATGGTATATTTCGTATTAATACAGGTGTTCAAAAGCCAGACCAAATTTTTTAACTTCAGAGGATATGAATGGAAAGGAAATGCATCAGATTATGTTAATGCACCAAACCCCAAAGATTACATAGAGCTTGTGACTTCCCCAAACAACCCTGAAGGGCTGCTCCGTAAGTCCATAATTAAAGGTTCATTGGCTGTATATGAtcatgctacatattggcctcattATACTCCAATCAAATATACATCGGATGAAGACATCATGTTGTTTGCCCTCTCCAAGTACAGTGGACATTCTGGTAGTCGGTTTGGGTAAGCTACTACTGCTAAATATGTTTCActatctcaatttatttattttagttttccgATATATGAATTGATCTCATAACATGATCATTTGTGGTTTAGGTGGGCATTTGTAAGAGACAAGGCTGTGTATGATAAATTGACAACGTACATGGCAACAAACAGCGAGGGAGTATCGCGTGACACACAACTCAGAAcactgaaaattataaaagaaattgtgttACAAATAAATCAACACAAGGGAACTGCTGGTGATTTCAATGAATATGGGTATACCACACTAAGAAACAGATGGATTAGACTAACCAATCTTGTAGCTCAGTCTAACCGATTCTCGCTTCAAAAACTATCTCCTGAATATTGCAATTACTTCAAAAGAGTCCGAGACCCTTCTCCAAgtaagcatatatatattatataatatcatattccCATTTTCAACACTTGGATAAACCAGGCACCATTAAATACCAAAAGAGTTTGTCATAAAACTTACACACTTCGagttttaaattttggaaaaatgagtCATATTGCACATCTCTTAGATAGCTCAGTATACTAGCCAAATTTGTTCTCTTCCAAGTGAATACACTTATAATTATAGTTGTATTATTATCAAAACTATACTGATGAATGCCTTATGCCCAAATGAATGATAGCATATGGATGGTTGAAGTGTGAATGGAAACAAGACACGGACTGCTCGGCTGTACTCCAGAATGGAAATATATTGACCCAAAGTGGAGTACGTTTTGAAGCAGGTAGTCGCTATGCACGTTTAAGTTTGATCAAGACACAAGATGATTTTAACCAACTGATGGAGCGTTTGAGTATTCTTGTAAAGGCTAAACAAACTAGTGCCTCTGAAGAGTACAATTACGAAATGGATCGAGAAAGATCAATCGAGCGTCCTTTCATCTACAGTGGTGATCAAGGGAGTTATGGGTCCTTCTAA

Functional annotation

Database	accession number	e-value	annotation
nr	AZG03002.1	2.6e-290	alliinase
Swissprot	P31757.2	2.0e-159	Cysteine sulphoxide lyase
trEMBL	A0A3G8G7W4	1.8e-290	Alliinase

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT1G34040.1	45.20	3e-111	399		Pyridoxal phosphate (PLP)-dependent transferases superfamily protein

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
Asa6G00996	AT1G34040.1	458	222	11	16	460	6	447	45.20	3e-111	399
Asa6G00996	AT1G34060.1	469	248	9	16	473	6	462	42.22	8e-111	397
Asa6G00996	AT1G23320.1	366	218	7	105	463	31	384	35.25	2e-68	256

Ortholog group

Species	Genes
Allium cepa	g118058.t1; g191038.t1; g191042.t1; g294232.t1; g294237.t1; g294238.t1
Allium fistulosum	AfisC2G08596; AfisC2G08603
Allium sativum	Asa0G00067.1; Asa1G04903.1; Asa6G00996.1
Arabidopsis thaliana
Oryza sativa

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF04863.10	EGF_alliinase	Domain	44	98	83.5	8.7e-24
PF04864.10	Alliinase_C	Domain	100	459	566.1	2.4e-170

Gene Ontology

Accession	Ontology	Name
GO:0016846	F	carbon-sulfur lyase activity

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K14548	UTP4, CIRH1A; U3 small nucleolar RNA-associated protein 4	EC:-	Ribosome biogenesis in eukaryotes	ko03008

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network