Detail information of Asa6G01986


Location
GeneChrStartEndStrand
Asa6G01986chr6520841436520871034-



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_020273797.10.0e+00protein CHROMATIN REMODELING 5-like isoform X4
SwissprotF4IV99.10.0e+00Protein CHROMATIN REMODELING 5
trEMBLA0A5P1EC950.0e+00Protein CHROMATIN REMODELING 5

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT2G13370.164.140.01217CHR5chromatin remodeling 5

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag159609.t1; g159610.t1
Allium fistulosumAfisC2G04365
Allium sativumAsa6G01985.1; Asa6G01986.1
Arabidopsis thalianaAT2G13370.1
Oryza sativaLOC_Os07g46590.1

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF00385.21ChromoDomain44950354.95.4e-15
PF00176.20SNF2_NFamily556828220.22.8e-65
PF00271.28Helicase_CFamily85797072.52.9e-20

Gene Ontology
AccessionOntologyName
GO:0003676Fnucleic acid binding
GO:0003677FDNA binding
GO:0004386Fhelicase activity
GO:0005524FATP binding

KEGG pathway
KONameEnzyme IDPathwayPathway ID
K11367CHD1; chromodomain-helicase-DNA-binding protein 1EC:3.6.4.12 --

Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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