result

Gene information

Detail information of Asa6G02838

Location

Gene	Chr	Start	End	Strand
Asa6G02838	chr6	724325807	724328111	-

Sequences

CDS

Protein

Gene

>Asa6G02838.1
ATGGGTTTACGGGATATTGAATCTACGCTTCCACCAGGGTTTAGATTTTATCCGAGCGACGAGGAGCTAGTTTGCCATTATTTATACAAGAAGGTGGCGAACGTAAAGATTTATGAAGGAACAATGGTGGAGGTAGATTTGCATACTCGTGAGCCGTGGGAGTTACCTGGTAAGTTATGTGCCCTTTGGTCAGAGTTATCATGTCAGTCATAGAGAATCAAAAGAAGATAACAGACATGAATTTGTAGGTTTACTGTGTGAAAACATAGTTTTTTTGTAGCATGCTTAATATGCAAGAAACGTAGGAAATGCGTGGGTTCTTGGGATTCCATCAAAACTAAACTATGCAGTCAGTAATTCGTCCTCCTTTTGAAGTATTATATTTGTACTGTTCCTTAtgtagaagaaacaaaagaaagttGTCATGATTGATGGTTCCTAATATTATACATTACATTCATACGTCTACAAACCGTTAGCGTTCAATAATTTGTTGATACCTTTTCTTTTTTCCCCctattcttttttctttctttgagtGTGTGTATTGTGTTCtattatatattcattcattttttCTACCATCTACTCTAGAGGCTTTGAATACATTTGTTCTTGTACGGGGGCCATCCCTATTCTCCTGCTAATTTTGTTTAAACATTATATATAACATTCGAGGACTGTAGTTTTATGATCAATCATATCAATATAAGATTTTTAGGGAATTAGATTAACTGTATATCCTGTGTTACTAAATAAATAAGGTAACCTTGTTAATATTTATGCCATCAAGTTTGCTATACAAGATTTGTAGTgttttaattcaagtaaaatcgTTATCATTAATTCTACCCATTCTGTCTCAGAGGGAGCCAAGCTGAATGATAATGAGTGGTATTTCTTTAGCTTTCGCGATCGAAAATATGCGACTGGTTCCCGGACAAATAGGGCAACAAAATCTGGTTACTGGAAAGCAACAGGAAAAGATCGAACAATATATAATCCAAAGACAAATGGAGTTGTGGGCATGAGGAAAACCCTAGTCTTCTATAGTGGGAGAGCTCCTAATGGAATGAAAACTGGATGGGTCATGCATGAATTCCGCGTAGAAAATCCTCATACACCGCCTAAGGTATAACATTTGTACCTTTCCCCGCTCTTGTTTGTTCACCCTATTTGCTGGTATCACAACTGCTGGCTATTGagttttttaattctaacatataTCAACTGCTGGCTATTGAGTGTATAATCCTTAGGCAGCAGCATATTGATTTTCATATTGCAAatatgtttgaactttgaacaaATTAACCGTTACATACTGAGTGATGTGCtatacatcatgaatagaaaatgGCAATTCCTTGCTACTCTCGGAGAATCCGGCACGTTAGAGAATGGTGAGAAATTGTCGCTTTCTATTCATGGTAGAAATAAATATTTCCCCTACAGTTGACATAATACTGTCATTTACGAATTATATCAAAAAAAATCTATCGTTGGCGATTGCATTTCATATACTTTAAGTAATACATTTTTAAAATGGTCGAAGTGGATTTACATATATCTTAGTACACTGATCAACAACATTGTTTAGCTGGATCCATCTTTGTTGCTTTAGCATTGATATTGTGTACCTTATAAGATATTATATGTTGCGGATGACTTGGAATGGGAGCCTACGGATGCTTCTTTCACTGTACTTCCATTTCAATAAAATCCGTCCAACTTATACATAATATGCCAAAgatatgatatgttcaaatttatttcCGCCCCATGCATCTGCTGTGAATATCAGTATTTTATGAGGAAGAAAATTCCTCAGCTCAAGTTGAGGACAATATTATGCAGCATGACCTTGTACCgattcttatcatttatcattatgCTATAATATGCTGTTGTATAGAGTCTTTACTTTGGTTCTAACCGGTATTCTCTGAATTTAAAATGTTAGGAGGACTGGGTACTGTGCAGAGTAACACATAAAAAGAAAGGAGACGTGGCTAGTTCATCGTCGCGAATGGATATTCCTTCTCCAGCGATGGATGACCAATCAATGTTAGGTGGATGCTTCGGGACGACGTGGGACCAAAATGAAGGCAGGAATGCAAATAATACATTTGACGCCAATAATTTAGAAGAATTAAACTACAATTTCTTTGATTTCACAACAGAGCTGAACACTACACCCTTGATGGGCATGGATACGAGTATGGGCTTAAAAGATATCGACGACTATGGGTTTCTGTTTGAGGAGAATTTGTTAGATGATGTTGGAGTTGGAAAGTATAATTAA

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020277093.1	1.7e-99	protein CUP-SHAPED COTYLEDON 3-like
Swissprot	Q9FLR3.1	1.5e-49	NAC domain-containing protein 79
trEMBL	A0A5P1FQB6	1.2e-99	NAC domain-containing protein

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT4G28530.1	64.94	3e-63	238	anac074;NAC074	NAC domain containing protein 74

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
Asa6G02838	AT4G28530.1	174	45	2	1	158	1	174	64.94	3e-63	238
Asa6G02838	AT5G61430.1	232	92	7	10	214	16	244	47.41	1e-50	196
Asa6G02838	AT1G56010.2	310	115	12	6	254	15	317	40.97	3e-50	195

Ortholog group

Species	Genes
Allium cepa	g10613.t1; g205533.t1; g297352.t1; g458732.t1; g523185.t1
Allium fistulosum	AfisC2G00051; AfisC2G01192; AfisC2G05337; AfisC2G05339; AfisC2G08061; AfisC4G04103; AfisC4G06621
Allium sativum	Asa4G01524.1; Asa5G05612.1; Asa6G01206.1; Asa6G02838.1
Arabidopsis thaliana	AT4G28530.1; AT4G28530.2
Oryza sativa	LOC_Os02g56600.1; LOC_Os04g43560.1; LOC_Os10g33760.1

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF02365.12	NAM	Family	11	137	98.1	3.5e-28

Gene Ontology

Accession	Ontology	Name
GO:0003677	F	DNA binding
GO:0006355	P	regulation of transcription, DNA-templated

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K05941	E2.3.2.15; glutathione gamma-glutamylcysteinyltransferase	EC:2.3.2.15	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network