result

Gene information

Detail information of Asa6G03179

Location

Gene	Chr	Start	End	Strand
Asa6G03179	chr6	812274748	812276407	+

Sequences

CDS

Protein

Gene

>Asa6G03179.1
ATGGCAAAAGGAATCAAAGCTCGAAAAATGTCAGTGGTTCAGTGGGTCATGAACTTACCGGATCGTTCATCGTTGTCCGTTAAATCCCCCACTTCAGATTTAATTAACAAGCTGGAAATCTTTCTCAGTAAAAATTCCTCCACTTGCAAATGGTTTCAGTACGAGGAGTTACAGCTTGCTAGCAACTACTTTTCGAAAGGTCTTTTTCTACAAATTTCGATTTTGGCATGTTTTCTAAAATCCTTTTTTGTTATAATAGTTTCTGTGATATTTTGAACAGATTATTTGATTGGAGAAGGTGGCAATAGTCGAGTTTACAAATTAAGGATGTCTTGCGAATGGAGATAAAATAGCTGTCAAGCTATCAAAGTTATCGAATGAGACATCAAAAGATTTTCTTTTGGAAGCTGATATAATTACTAAATTGCAACGTGAACGTATTGTTCCTTTGTTGGGAATTTGTGTTGAATGCAATACGTTTCTTTCGATTTATGGTTATTTCTCCAAAGGAAGTTTAGAGGAAAATCTACATGGTAAAAGTTCTAAATATTGTTTTTTCATCATCACAAATACCTAAAATTTTCAAggctaaatatatttgtttaatttggaAAAATTACAGGAAATTAAATCAAAACTCCATTAGCCTGGGATAAAAGATTTAAAATCGCAGTTGGTGTAGCCGAAGCATTGAATTATTTGCATATGGGTTCATCTGAATCAGTTGTGCACAGAGATGTTAAATCTTCAAATATCCTTCTTACTGACAAATTTGAACCACAGGTAAAATTACATTCTAATCAATTACCAGTTTTGTTTTTCCAAATTACCTCATACATATTAAATGAGGAATTTTACATGTGTGTAGTTGGCTGATTTTGGACTGGCTATATGGGCACCAAAGAATTCTTTGTCTGAGACTCAAAGTGAAATTGTAGGGACTTTTGGGTATGTCATTTTGTTGATTTTATCATTATATTAACATGCATTTGGCCTGCTATCTAATTgacaatatatttttaactttttgatAGATATCTTGCGCCTGAATATTTCATGTATGGTAAAGTCAGCAGTAAGATCGACGTCTATGCATATGGTGTTGTTTTGCTTGAATTATTGACTGGTAGAAAACCAATTTCAGATGACAGTCCTAAAGGCCAAAAGAGCTTAGTTATGTGGGTAAGATATATCTTTCAATGCTAATTATACTTCTTGATATTGTAAGTCTGAATAGCGTTAATTTTGTGCATGTTGTTAATGTCAGGCCATACCAAGACTAGAAAGAGGAGATCTGAGTGATTGTTTGGATCCAAATATTAATGGGGTTTTCGAAGAGAAGAAAGTAAGAAGAATGATAAAGGTATCATCTTTGTGCATTACACGTACGACGCGACTTAGAACGCAAATGAGTCAGGTACTCAGCCTTTTaaaaggggaagaggaggaggtggtTCGGACATGGCTAAACTCAAAATCAATCATGGAATGCCAAGATGAAGAAGCATATCCTAGCTTGAGCATCGGGTCACATTTGGGACTAGCATTGCTTGATGTTGAAGAAGACGATGCTTCTGAAATTAGCTTCGAAAAAAACCAGCTGAACTCTTTAGATGATTACCTGATAGAGAGATGGAGCAGATCTTCAAGTTTTGATTAG

Functional annotation

Database	accession number	e-value	annotation
nr	ONK72617.1	2.4e-105	uncharacterized protein A4U43_C04F21270
Swissprot	Q8RXC8.1	3.7e-42	Protein ROP BINDING PROTEIN KINASES 2
trEMBL	A0A5P1F5C3	1.8e-105	Protein kinase domain-containing protein

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT1G77280.1	55.73	2e-65	245		Protein kinase protein with adenine nucleotide alpha hydrolases-like domain

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
Asa6G03179	AT1G77280.1	253	103	5	63	309	545	794	55.73	2e-65	245
Asa6G03179	AT4G35030.3	229	113	2	67	294	209	436	49.78	3e-63	238
Asa6G03179	AT2G16750.1	216	101	2	67	281	378	591	51.85	5e-63	238

Ortholog group

Species	Genes
Allium cepa	g333040.t1
Allium fistulosum	AfisC5G05163
Allium sativum	Asa4G04995.1; Asa5G02247.1; Asa6G03179.1; Asa6G05218.1; Asa7G00717.1; Asa7G07608.1; Asa8G02074.1
Arabidopsis thaliana	AT2G16750.1; AT4G35030.1; AT4G35030.2; AT4G35030.3
Oryza sativa	LOC_Os03g13820.1; LOC_Os03g13820.2

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00069.22	Pkinase	Domain	68	229	93.1	1.6e-26

Gene Ontology

Accession	Ontology	Name
GO:0004672	F	protein kinase activity
GO:0004713	F	protein tyrosine kinase activity
GO:0005524	F	ATP binding
GO:0006468	P	protein phosphorylation

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K04730	IRAK1; interleukin-1 receptor-associated kinase 1	EC:2.7.11.1	MAPK signaling pathway	ko04010
			NF-kappa B signaling pathway	ko04064
			Toll-like receptor signaling pathway	ko04620
			Toll and Imd signaling pathway	ko04624
			Neurotrophin signaling pathway	ko04722

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network