Detail information of Asa6G03659


Location
GeneChrStartEndStrand
Asa6G03659chr6961821814961825951+



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_020252990.15.1e-64MADS-box transcription factor 26-like isoform X2
SwissprotA2YQK9.21.3e-56OsMADS26
trEMBLA0A5P1FG393.7e-64Agamous-like MADS-box protein AGL12

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT1G71692.147.625e-41 164AGL12;XAL1AGAMOUS-like 12

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag344263.t1
Allium fistulosumAfisC2G06260; AfisC4G03334
Allium sativumAsa4G02602.1; Asa6G03659.1
Arabidopsis thalianaAT1G71692.1
Oryza sativaLOC_Os08g02070.1; LOC_Os12g10520.1; LOC_Os12g10520.2

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF00319.15SRF-TFDomain115669.88.9e-20
PF01486.14K-boxFamily8716976.01.7e-21

Gene Ontology
AccessionOntologyName
GO:0003677FDNA binding
GO:0003700Ftranscription factor activity, sequence-specific DNA binding
GO:0005634Cnucleus
GO:0006355Pregulation of transcription, DNA-templated
GO:0046983Fprotein dimerization activity

KEGG pathway
KONameEnzyme IDPathwayPathway ID
K09264K09264; MADS-box transcription factor, plantEC:- --

Expression pattern in different tissues

Expression pattern in BioProjects

Click here to link to expression search in BioProjects.  



Co-expression network

Click here to link to co-expression network search.