result

Gene information

Detail information of Asa6G05433

Location

Gene	Chr	Start	End	Strand
Asa6G05433	chr6	1476619144	1476620901	-

Sequences

CDS

>Asa6G05433.1
ATGAAGATTTCTTGCGCGGATGAAGAAGCGGAGAATCATCAACAAAAGACTGTTGTTGTTGGCGTTAAAATGGATCCTCAGAGCAAAGAGCTCTTAACGTGGGCGCTGGTTAAAGCAGCTAAAACCGGAGATAGAGTAGTGGCACTTCATGTGATTCCTACAAATTCAGAGGTTTATGGTGGAAAAATGTCTTCTCTTTTGTCGATCGTGAAGGCTTTTGATTCTCTTTTAGCTGTTTATGATGGGTTCTGTAATCTTAAACAGATTGATTTGAAGCTAAAATTATGCAGAGGATCTTCTACAAGAGAAGTCTTGGTTCGCGAATCGATTACTTATGGTGCTAATAGTCTTATATTGGGCGTTAAAACAAGTAACTCTAAAATAAGATATTTATCCACCTCAACAGCAAAGTACTGTTCGAAAAAATTACCTAAAGATTGTTCTGTGCTAGCAGTCAGTAATGGCAAGATTTTGTATCACAGAAAATCTACAGAGTTGAAGCATTCCTTGAAGAAAGAAAAAGATGAGAACTACGATTATTTGTTTATGACTGATGACGGAACGATAAAGAATCACGATGCAACTGGGCTTTCTTCACAGTGTTTTCTTTTCCCTTTACCATCTCATTCATCTACGCTTAAAGAAGAGAATGATCAAGATTGTAGAATGAACGGTTCCTTGGCTTTAGTCTCATCAAATAAATCTGCATCCAATTCAAAGACAAACTCGGTTCGTGCTCTTATTGTTCGTGAGTTGGAGGAAGCAAAACCGAGTAGGCCATTACCGAGGAAAACTGTGTCAAGTGACAAACATACAAGAGATGGGGATGAAAAGTCGAAAGTTTCCATTTTTCAATGGGCAATGAGACCTCCTAGTCAGTATATGCTACCGATTATTGGTTATTCAAGTCGTAAAGCTATAGTTCATGTTGAAAGAACTGATTCATCCTGTTCCCCTGTTACAATATGTGAAGAAGAAAATGAAATTCCAACTGAATTGAAATCTCTTCAAAAGAAGTATTCGTCAGTTTGTAGGTTCTTCAGCTATGAGGAGCTTGTATCTGCAACATCCAATTTCTCCTCAGATAATTTGAATCGGGAAAGGAGGTTGCAGCCAAGTATATAA

Protein

Gene

>Asa6G05433.1
ATGAAGATTTCTTGCGCGGATGAAGAAGCGGAGAATCATCAACAAAAGACTGTTGTTGTTGGCGTTAAAATGGATCCTCAGAGCAAAGAGCTCTTAACGTGGGCGCTGGTTAAAGCAGCTAAAACCGGAGATAGAGTAGTGGCACTTCATGTGATTCCTACAAATTCAGGTACTTTTGATCCAAACCAATTTTGGTGAACTCCggttttgttttgattgattgattaaagACCGTGTTGCAGAGGTTTATGGTGGAAAAATGTCTTCTCTTTTGTCGATCGTGAAGGCTTTTGATTCTCTTTTAGCTGTTTATGATGGGTTCTGTAATCTTAAACAGGTTCGTGCTTGATAATCATATGACAATCACTGAAATCCATTTGTTGATTGAGTATTGAGATTATTAATCGATATATCTGTGTTGATGTAGATTGATTTGAAGCTAAAATTATGCAGAGGATCTTCTACAAGAGAAGTCTTGGTTCGCGAATCGATTACTTATGGTGCTAATAGTCTTATATTGGGCGTTAAAACAAGTAACTCTAAAATAAGGTGAACATAACAAATTTCATTTTGTACTTTGATTATTGATTTTGAGTGCTCATATCTGTTAATTTCGTAGGCTAATTTATTGTTTTTTTGGTAGATATTTATCCACCTCAACAGCAAAGTACTGTTCGAAAAAATTACCTAAAGATTGTTCTGTGCTAGCAGTCAGTAATGGCAAGATTTTGTATCACAGAAAATCTACAGGTATAATTTGATTCACATGTTATTTTGGTTTCGGTTACCATCACAAATTAATAAGCTTACCGTCATTTAAATGCAGAGTTGAAGCATTCCTTGAAGAAAGAAAAAGATGAGAACTACGATTATTTGTTTATGACTGATGACGGAACGATAAAGAATCACGATGCAACTGGGCTTTCTTCACAGTGTTTTCTTTTCCCTTTACCATCTCATTCATCTACGCTTAAAGAAGAGAATGATCAAGATTGTAGAATGAACGGTTCCTTGGCTTTAGTCTCATCAAATAAATCTGCATCCAATTCAAAGACAAACTCGGTTCGTGCTCTTATTGTTCGTGAGTTGGAGGAAGCAAAACCGAGTAGGCCATTACCGAGGAAAACTGTGTCAAGTGACAAACATACAAGAGATGGGGATGAAAAGTCGAAAGTTTCCATTTTTCAATGGGCAATGAGACCTCCTAGTCAGTATATGCTACCGATTATTGGTTATTCAAGTCGTAAAGCTATAGTTCATGTTGAAAGAACTGATTCATCCTGTTCCCCTGTTACAATAtgtgaagaagaaaatgaaattccAACTGAATTGAAATCTCTTCAAAAGAAGTATTCGTCAGTTTGTAGGTTCTTCAGCTATGAGGAGCTTGTATCTGCAACATCCAATTTCTCCTCAGGTAGCTCTTTAGGTTTATTGATTCCCATTACTTAACTAAGAGTACAAATTGACTGTAGTTACTTATAATTTAAGGCTGGAGCACTACTATGTTTTGGAGTAAGAAATAAACATGTGAAGCAGAAAAATACATATTAAGAGCATCGATAATATTGTCACCATATCTAATTAATATCGAGAAGATAAAAAAAATGCTACATACCAAGTTTAACAAATAGTTACCAAAGCTATATAGATATTGAGAGGATTGAAAATGTATATTAATTTTGTTATTCGATGTATTAAAAATTGCGTGGTGCAGATAATTTGAATCGGGAAAGGAGGTTGCAGCCAAGTATATAA

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020245982.1	1.1e-91	receptor protein kinase TMK1
trEMBL	A0A5P1E7Z8	3.3e-74	Protein kinase domain-containing protein

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT1G77280.1	56.38	1e-42	170		Protein kinase protein with adenine nucleotide alpha hydrolases-like domain

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
Asa6G05433	AT1G77280.1	149	63	2	16	164	48	194	56.38	1e-42	170
Asa6G05433	AT1G77280.1	160	88	6	214	364	303	450	31.87	2e-13	73.6
Asa6G05433	AT1G21590.1	410	199	13	17	364	13	414	34.39	2e-41	166

Ortholog group

Species	Genes
Allium cepa	g507385.t1; g67799.t1
Allium fistulosum	AfisC2G01531; AfisC3G03693
Allium sativum	Asa2G02981.1; Asa6G05432.1; Asa6G05433.1
Arabidopsis thaliana	AT1G21590.1; AT1G77280.1; AT5G63940.1
Oryza sativa	LOC_Os11g08950.1; LOC_Os12g07990.1; LOC_Os12g08050.1

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00582.23	Usp	Domain	16	149	41.7	1.4e-10

Gene Ontology

Accession	Ontology	Name
GO:0006950	P	response to stress

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K04730	IRAK1; interleukin-1 receptor-associated kinase 1	EC:2.7.11.1	MAPK signaling pathway	ko04010
			NF-kappa B signaling pathway	ko04064
			Toll-like receptor signaling pathway	ko04620
			Toll and Imd signaling pathway	ko04624
			Neurotrophin signaling pathway	ko04722

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network