result

Gene information

Detail information of Asa6G05591

Location

Gene	Chr	Start	End	Strand
Asa6G05591	chr6	1520230993	1520234182	-

Sequences

CDS

Protein

Gene

>Asa6G05591.1
ATGTGTGACTTCTTTTGGAAAAGAATGGAAAACAACACAGACGAACTAGGCGGAGATTTATCCGACATCATTCGCAGCAGCCTAAACCAATCCGACATACAATCACCAACTGACACCTGGCACTTCCCTGCTATTGATTCCGACCTTCTGTCCTTCGATCAGCAGACATCCACCGCCAATGACTACATGGTCCAAGGCGATCTGTTTGGCATGAGCGACCAACTTGTCGTGGCTAGCAACGATGTAAAAAACCAAGGTTCGAACGGCATTTTTTCTCGGGTACTTCAGATATCGCCTATTAGACATTCTCCGATCTCTCCTAGGGCGATAAGACCGATTTTACATCATGATCATATGGTTAAAACTGACCATGCTGCTCGTATCTCTTCTTTTCCGCGCCCTCCTCCTGTTGGGACTAAAAGAAGGTACTACTTCTTTGTTcattattgatttgtttatatatttaggtTACTGATTTACTATCGGCAAacttctgtgtgtgtgtgtatgagaacCACGACGGCTTTTTTTGGATATTAATTGTATTTCAGTGCATATTTTCTACAATTTTGtataatttacaattttattttttatctccCCAATGATGtacattttttcaagaaaaaagcATAGCAAAGATCTCACTAAGTGGATTTGTGGCATTTTCGAATGAGATCCACTGTTCCCAAAAGAGTATATCATTTATCTTTCTTTTGCATCTACCttgggaaaaaaaattataatgaattGGAGTCaggtatttattttatattttgcataaaGCAACCTTGCAGTGAGAATATACCTGAATAGGGATATGGGTTTTGGAGAAAAGATAGCTtcctttttattcttcttctttatatttctCTTTTTGGGCAGCCAAGCCACTAATATTTGTTGGCGTTTAATGTGCATGTGGCTTGCTGCAAATCTGAAGTTCCAAATATAAAAACAAGACATATAAGTAGATAGGTAAGTAACATTAGATTTTAGTTAGTTATCACTTTTTAATGAAAATCAGTCTCTTTCATTTAAACTGCAATCCACATGTCTGAGCCTTCAAATAAATATTGCATGataataaatttgtaaaattttccatgaaattttaactaacatgtaaagcaaatatgaatgatgaaattaaAAGCAGAAAGGGACAAGGGAAAAAAGTGGTGTGTGTACCAGCACCGGCAGCAGCAAGCAGCAGATCAAGTGGAGAAGTGGTACCATCTGATCTTTGGGCTTGGAGGAAGTATGGCCAAAAACCTATTAAGGGTTCTCCTTATCCCAGGTAATCGTTTCTATGTCAAAGTATTCTTCTTAACTTTTTCGCTCTTTCCGTATCATCTACACTGTACAACTAGCATTAACCTGAAAATAACAGCATGCATAACAATCATCTTACAATATTATCTTTGCTATACTTTATGCAAGGTAATgattcttcttctccatcatccaaattgaattaatactataacaaaaatgattatacCATATGTTGCATAACAAAGATTAACATTCCGTTATGATGTAGCAATAAACTAGTAAAGTAATATAGCAACATTCTCCTAATCCGAAAAAAGTTATGCTTCCACGtccaatatataataatcaaaatcaattaactaaaaaaaaaaaatctgtacaATTAATAACATGTACTTATTTCATATGGTTCAATGGTGTCTTTTAAAAGAAGGTATCATCTTCTTAAAGCTCCCACTACTAAATatgttttttatgttaattaaaacaaatatgcTAGAATTTACCATTTCAACCAGAAATTTGCACATCATTTATTATTAAAGGTttgattttcaatataatattattctatttgtttattgatttacgtatgttaacattattaattataacagTTAGTTATATGCAAATCACTTACCACTATCTTTTCACCAAGTCCGTATCTTTTTGTAAAAAATACATATGTGAACAAAAAAGCAAATATTTAAGTCGTCATTTAATTTTAACCTATACACAcacaatcatatatatgtatattgtcaatgcattattaaatgtttattttatacgtGGATATAAATTTAGCGAGTTtggttaaaactgaataaaaaggTGATACGCGCATACAGTAGTAGTAcagatatgtaaatataaatgaacagggttaaaaAGGGACATAGAGAACCAATCTTTGGGACAAAGGAATCCTTTTGTGAAGGACCATAACTATCTCATAATGGGAAGCTTCTATCATTTATTTAACTTGATAATTACATGGTTACAAAAATTGAGGAGTTACATTTAGTTACACTTACAGAATAATTATTTCATCACCGTTATCCTGGTCATCGGTATAAAACTCGATAGCTTTTATTTTACAACAATACGAACATTGCATGTGGACGGAGTAGGAAACATTAATATGCTACTCAACTCAATATGCCAACAAAATGCATGTGAAATCACATCGCTGGTTTTGACTTAATCAACTTCGTTCTTCTACAGATCTAAATGATTAAATATTTGATCTAGTTAAGATCGAAATCAACGCAGACAAATCCATGGTGCTTTGAACTGACTATGTGCTTACTAGTGTAAAAACCAAAACACTGCATGCATTTAAAAAACTAAACCTCGTGAACAAAAATGGTGCAGGGGATATTACAGATGCAGCAGCTCAAAAGGATGCTCAGCAAGAAAACAAGTAGAAAGAAGCAGAACCGACCCAAACATGCTAGTCATCACCTACACATCCGATCACAACCACCCTTGGCCTACTCAACGTAACGCACTTGCTGGCTCCACCCGATTTCAGCCTTCTAAATCCAAAATCAACACCTCCGCTTCGTCCTCTTCTTCTAAAAAACCTAATAACATCACAAAAGATCATAACCAGTCGGAAAAAAGTAACATTGATACTAAAACCATCAATGTGAAAGAAGAATTGATATTAAATGAGCAAATTCCAATGGATGATGATTACACAtacaatgaagatttctataatgaCCCATTGATTAGTTCATGCAGTCACATGGATGACTTCTTTGCGGATTTGGCGAAGCTGGAGAGTGACCCGATGAGCCTCATTTTCACAACACCAGATGATGAAGAAGATCATAAAGGGGGTGATAAAGGATTGGATGTTGATCCATTTGTTAACATGTTTGATTGGGGTAAAGGGTTATAA

Functional annotation

Database	accession number	e-value	annotation
nr	XP_010920047.1	3.0e-70	probable WRKY transcription factor 14
Swissprot	O64747.1	1.0e-51	WRKY DNA-binding protein 35
trEMBL	A0A8K0IFE0	2.0e-71	Putative WRKY transcription factor 14

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT2G34830.1	57.52	2e-61	233	AtWRKY35;MEE24;WRKY35	WRKY DNA-binding protein 35

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
Asa6G05591	AT2G34830.1	226	76	6	127	336	175	396	57.52	2e-61	233
Asa6G05591	AT1G30650.1	234	98	4	137	362	185	413	52.56	8e-56	214
Asa6G05591	AT4G01250.1	192	72	5	139	328	108	269	45.83	2e-38	156

Ortholog group

Species	Genes
Allium cepa	g56143.t1; g78425.t1
Allium fistulosum	AfisC2G09028; AfisC3G00809; AfisC5G05364
Allium sativum	Asa6G00515.1; Asa6G05582.1; Asa6G05591.1
Arabidopsis thaliana	AT1G30650.1; AT2G34830.1
Oryza sativa	LOC_Os02g47060.1; LOC_Os04g50920.1

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF03106.12	WRKY	Domain	170	227	89.1	1.6e-25

Gene Ontology

Accession	Ontology	Name
GO:0003700	F	transcription factor activity, sequence-specific DNA binding
GO:0006355	P	regulation of transcription, DNA-templated
GO:0043565	F	sequence-specific DNA binding

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K13425	WRKY22; WRKY transcription factor 22	EC:-	MAPK signaling pathway - plant	ko04016
K13425	WRKY22; WRKY transcription factor 22	EC:-	Plant-pathogen interaction	ko04626

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network