Detail information of Asa6G06348


Location
GeneChrStartEndStrand
Asa6G06348chr617626599651762667535+



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_020247322.11.6e-201protein CHROMATIN REMODELING 24
SwissprotQ8W103.11.9e-154DNA excision repair protein CHR24
trEMBLA0A5P1E0Y91.2e-201Protein CHROMATIN REMODELING 24

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT5G63950.161.112e-162 569CHR24chromatin remodeling 24

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag180717.t1
Allium fistulosumAfisC5G00879
Allium sativumAsa6G06328.1; Asa6G06329.1; Asa6G06331.1; Asa6G06348.1
Arabidopsis thalianaAT5G63950.1
Oryza sativaLOC_Os04g59620.1; LOC_Os04g59624.1; LOC_Os04g59624.2; LOC_Os04g59624.3

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF00176.20SNF2_NFamily174467151.42.4e-44
PF00271.28Helicase_CFamily53959721.90.00015

Gene Ontology
AccessionOntologyName
GO:0003677FDNA binding
GO:0005524FATP binding

KEGG pathway
KONameEnzyme IDPathwayPathway ID
K20093ERCC6L, PICH; DNA excision repair protein ERCC-6-likeEC:3.6.4.12 --

Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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