result

Gene information

Detail information of Asa6G06540

Location

Gene	Chr	Start	End	Strand
Asa6G06540	chr6	1815119686	1815123631	-

Sequences

CDS

>Asa6G06540.1
GTTCCTCAAATGCATTGATAGCTGTGGCTATTGATAAAGATAAAGGAAGCCAAGGTGCTTTAAAATGGGCTATCGACAATCTTGTAACCACCAAGGGCCAAGTTATCACATTAGTTCATGTCAATACCAAGGGTGGAGGAAATGAAGGCGGGCAAGTATTTAAAGCTCCGACTGATCAACATGTGAAGGAATTGTTCCTCCCTTTCCGCTGCTTCTGCACTAGAAAAAATGTGCAATGTGAAGATATAGTGCTTGAAGACACGGATGTTGCAAAGACAATAGTCGAATTTGTGGGACATGCAGCAATTGAAAAGCTTGTTCTTGGAGCTACTTCTAAAGGAGGATTTGTCAGTAGATTTAAAGCATCGGATATGCCAACAAATATTTCAAAAGCAGCTCCAGATTTCTGCACAGTATATGTGATATCGAAAGGAAAAGTTCAGTCAGTAAGAAATGCAGTCAGAGCAGCACCTACTGTTTCCCCTCTGCGTGCACAAATACAAAACCAAACTGGTGAACTCGCATGGTTACATTTATTTACCAAACTAATCAAAATAAAAAACATAAAAAATGAAATAAAGTTCATTCAACACACATTATGCAGGTCACCATTCTCAAGGCCAGGAAGAGCACATATCAAGTCATTCGCAGAACTGTCAGACAATACAGACATATCATACATCGGAACGAACAGACCAAGCATGGAACGAGGAATGTTCCCACCGAGGCCTGGGTCTGATTCTCTTAATAATAGCTTTGAAAATCGACATCTAGGATCAGATACCTACAGTATAGGAAATGATTATTCATTTCAAAGTAGCTCATCGTGGTCATCCCAGCCAATGGACGATGTTGAGGAAGAAATGAAGAGGTTGAAGCTGGAACTCAAGCAGACAATGGATATGTACAGTCAAGCTTGTAAAGAAGCGCTCGTAGCAAAACAGAAGGCACTGGAATTGCATAGATGGAAGATGGAAGAAGAGCAAAGATTACAAGAAGCTCGACTTGCGGAAGAGGCAGCGTTGGCAATGGTGGAAAGAGAAAGAGCAAAATGTAAGGCTGCAATGGAAGCAGCCGAGGCTCAACATAGAATTGCAGAACTGGAAGCACAGAAAAGAATGCAAGCAGAGATGCAGGCGCTTAAAGAGGCTGAGGAAAAGAGCAATACCGCAGGACAAGACATTCGATATCGCAAGTATACGATTGAAGAAATTGAACAGGCTACTGAAAATTTTGCAGAAAATAGAAAAATTGGAGAGGGGGGATATGGCCCTGTATATAGAGGCTACCTTGATCACACTCAAGTAGCTATCAAGGTTCTTAGACCTGATGCAGCACAAGGAAGAGCACAGTTTCAGCAGGAGGTAGAAGTATTAAGTTGCATTCGACACCCAAACATGGTTCTATTATTAGGTGCATGCCCTGAATACGGATGTCTAGTTTATGAATACATGGCAAACGGAAGCCTAGAGGACAGGCTAGCTTGTCATGGCAATACACCAGTTATCCCTTGGCAACATCGTTTTCGTATAGCCTCAGAAATCGCAGTTGGACTACTATTTCTACACCAAACAAAGCCTGAACCGATAGTACACAGAGATCTAAAACCAGGAAACATTCTACTGGATAGAAATTATGTAAGCAAGATAAGCGATGTGGGACTTGCCCGTCTAGTCCCGCCCTCGGTAGCTGATACAGTCACTCAGTATCGAATGACTTCTACAGCAGGGACTTTCTGTTACATTGATCCTGAGTACCAGCAGACAGGCATGTTAGGAGTTAAGTCGGATGTATATTCTTTAGGGATTATGTTGCTTCAAATCATTACAGCAAAGCCACCAATGGGGCTGGCGCACTACGTCAGTCGTGCAATTGAGAAAGGTACATTTGAGGAGATGCTTGACCCTGCAGTGACGGACTGGCCAGTAGAGGAGGCACAAAAGTTTGCAGAATTGGCACTACAATGTGCAGAGTTGAGAAGAAAGGACAGGCCTGATTTAGGGACAGTGGTGCTTCCGGAGCTGCATAGATTGAGAGCTCTCGGAGAGGATAATATGAGTAAATGTGTGCTACCAAGCATGCATAACTCACCGATGAATAGCCAAGTATCATTGCAGGACATGATGAGCAACCCAGGACTCTCTGGATATACTAGTTCCAGAACATCATACACATCTAATGGAAGAAGATCAAATGTAGA

Protein

Gene

>Asa6G06540.1
GTTCCTCAAATGCATTGATAGCTGTGGCTATTGATAAAGATAAAGGAAGCCAAGGTGCTTTAAAATGGGCTATCGACAATCTTGTAACCACCAAGGGCCAAGTTATCACATTAGTTCATGTCAATACCAAGGGTGGTAAGATGTAACGTTAATTTCTTATTTCTTGCTATAATGTTCTTTCAAATCATAAGAGGTAACATAGACTCGAGAGTTCACCATTGAATATATCATCTTTGTCTATATAGGAGGAAATGAAGGCGGGCAAGTATTTAAAGCTCCGACTGATCAACATGTGAAGGAATTGTTCCTCCCTTTCCGCTGCTTCTGCACTAGAAAAAATGTGATTATACGAGTTTCAAGCCATCCATGGCATTTATATAAAAGCGTACCTGTTTATTTTGTGTGCTTATACCATCAATTTGAAATTTGTAGGTGCAATGTGAAGATATAGTGCTTGAAGACACGGATGTTGCAAAGACAATAGTCGAATTTGTGGGACATGCAGCAATTGAAAAGCTTGTTCTTGGAGCTACTTCTAAAGGAGGATTTGTCAGGTGAACTTCTTGCaaccaaacttgttttacaaaGTTTGCGTCAGAGCTAAAGCAGCATTTGTTTCAGTAACAATCATCTACCTGATACAATTGTTGTGTCACTGCAAAGCAAATCCATATATTAATAGCAGTCATCTGTTAGAACTTTAAACACCATTTGTTAATTCAAGTGAAAGTAAACTGGACTGTCTTATCAAGTAGATTTAAAGCATCGGATATGCCaacaaatatttcaaaagcagCTCCAGATTTCTGCAcagtatatgtgatatcgaaaggAAAAGTTCAGTCAGTAAGAAATGCAGTCAGAGCAGCACCTACTGTTTCCCCTCTGCGTGCACAAATACAAAACCAAACTGGTCTCAAGTCTGCTTCCGAATCACCTAGACGCTCTATCAGTACTCCGAGAGGTTTGAATTTAACCctacttgatcctttgattttctTCAATTTTAGACATAGCTATCTGAATCTCCGCAAGTAGTATTAATTCAAGATGTTTTGTGCAAACTAAATGTATAAAAGTGCttaaattcattattttctgaattgaACCAGCGGTGCAGTGTGAATCTGTGATATTGGGACACAATTTTGTTTCCAATATTGGAAAATTTATCCTAAACCATACCACTCCTAGTTAACTTGTCCACATTTTTTTTTTCCAGTGTCTCAAGAAGAATCACCAAACAGTAAGAGCCTAAACGAATTCAGGTGAACTCGCATGGTTACATTTATTTACCAAactaatcaaaataaaaaacataaaaaatgaaataaagttcATTCAACACACATTATGCAGGTCACCATTCTCAAGGCCAGGAAGAGCACATATCAAGTCATTCGCAGAACTGTCAGACAATACAGACATATCATACATCGGAACGAACAGACCAAGCATGGAACGAGGAATGTTCCCACCGAGGCCTGGGTCTGATTCTCTTAATAATAGCTTTGAAAATCGACATCTAGGATCAGATACCTACAGTATAGGAAATGATTATTCATTTCAAAGTAGCTCATCGTGGTCATCCCAGCCAATGGTGAGAATACTTTCCTCATTTATAAAGTTCATGAAATCACACCTTTTTTTTAATCCCTGATAACATGATTTATTATGATTGTTACTTCAGGACGATGTTGAGGAAGAAATGAAGAGGTTGAAGCTGGAACTCAAGCAGACAATGGATATGTACAGTCAAGCTTGTAAAGAAGCGCTCGTAGCAAAACAGAAGGTGATAAATGCACTAAATCATTCACTTGTCATCCACTGTACATGTACTTAATTTGATTTACGTATAGGCACTGGAATTGCATAGATGGAAGATGGAAGAAGAGCAAAGATTACAAGAAGCTCGACTTGCGGAAGAGGCAGCGTTGGCAATGGTGGAAAGAGAAAGAGCAAAATGTAAGGCTGCAATGGAAGCAGCCGAGGCTCAACATAGAATTGCAGAACTGGAAGCACAGAAAAGAATGCAAGCAGAGATGCAGGCGCTTAAAGAGGCTGAGGAAAAGAGCAATACCGCAGGACAAGACATTCGATATCGCAAGTATACGATTGAAGAAATTGAACAGGCTACTGAAAATTTTGCAGAAAATAGAAAAATTGGAGAGGGGGGATATGGCCCTGTATATAGAGGCTACCTTGATCACACTCAAGTAGCTATCAAGGTTCTTAGACCTGATGCAGCACAAGGAAGAGCACAGTTTCAGCAGGAGGTACAGATATGATACATGTAACAACGTTATCTATAAGCAAGTATGAATCTATACCAACATAACAAACTTTTAATTATACCACTAGTAGAAATTATTAGCTTTATATCCTGATTTGTACTGGTGGTCATATCCAAAATCTCCAATGGATGgtactttctttttttctttatcttaatgttgataaatataacattatttcaataacaaatattGCAGGAAAGGtcatcaaaatggaatttaaattgcaGGTGGCAAAGTTCATACTTATAATCGAAAATAGTTCCATAGATTACGAAAATTAATATTTGATGTCATATAAGTGTATACTAGAAACCTTTGGTTTGAGTAggttattaattaacatttaagtACGAATGTATTAACTCTTCTTGGCACAACAATCACttataattttgaaatagattttaatCCTTGAATATCCATGTCTAAACCCTTTTTTTCCTCATGATCAAtctttatttgatttgaaacagtaaaatttgaactgtatatacaAATAACTTACTATTTTCGTACCAGGGATAAATTGATTTTTCTCAACAGCAATTTTAGTTagtttagaaaatttaatcaaaGAGATATAATTTGAAGCAGGATTCAAATCATCAGTTTTAAGATTATCAGCAATCATTGATTGCAGGTAGAAGTATTAAGTTGCATTCGACACCCAAACATGGTTCTATTATTAGGTGCATGCCCTGAATACGGATGTCTAGTTTATGAATACATGGCAAACGGAAGCCTAGAGGACAGGCTAGCTTGTCATGGCAATACACCAGTTATCCCTTGGCAACATCGTTTTCGTATAGCCTCAGAAATCGCAGTTGGACTACTATTTCTACACCAAACAAAGCCTGAACCGATAGTACACAGAGATCTAAAACCAGGAAACATTCTACTGGATAGAAATTATGTAAGCAAGATAAGCGATGTGGGACTTGCCCGTCTAGTCCCGCCCTCGGTAGCTGATACAGTCACTCAGTATCGAATGACTTCTACAGCAGGGACTTTCTGTTACATTGATCCTGAGTACCAGCAGACAGGCATGTTAGGAGTTAAGTCGGATGTATATTCTTTAGGGATTATGTTGCTTCAAATCATTACAGCAAAGCCACCAATGGGGCTGGCGCACTACGTCAGTCGTGCAATTGAGAAAGGTATTTTCTATGTTATAATTAACACAGATTCATTTAGCTCCAGAATAAAATTATATGGATGTTTAGATGCTTTGCTATTATTTTGGTATTATTGTTTAGGTACATTTGAGGAGATGCTTGACCCTGCAGTGACGGACTGGCCAGTAGAGGAGGCACAAAAGTTTGCAGAATTGGCACTACAATGTGCAGAGTTGAGAAGAAAGGACAGGCCTGATTTAGGGACAGTGGTGCTTCCGGAGCTGCATAGATTGAGAGCTCTCGGAGAGGATAATATGAGTAAATGTGTGCTACCAAGCATGCATAACTCACCGATGAATAGCCAAGTATCATTGCAGGTTACAAAATGGATAATGTACACgcctttaaatgatttaaatgatatcaAAATTCTGAACTGATTTTTGTACAGGACATGATGAGCAACCCAGGACTCTCTGGATATACTAGTTCCAGAACATCATACACATCTAATGGAAGAAGATCAAATGTAGA

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020689457.1	1.1e-276	U-box domain-containing protein 52-like isoform X1
Swissprot	Q8S8S7.1	1.1e-103	Serine/threonine-protein kinase
trEMBL	A0A8T3BNR0	2.5e-275	Protein kinase domain-containing protein

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT2G24370.1	57.69	0.0	812		Protein kinase protein with adenine nucleotide alpha hydrolases-like domain

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	bit score
Asa6G06540	AT2G24370.1	780	258	13	2	719	16	785	57.69	812
Asa6G06540	AT1G16760.1	734	283	9	3	703	15	741	55.99	800
Asa6G06540	AT4G31230.1	750	274	12	3	703	15	760	56.40	781

Ortholog group

Species	Genes
Allium cepa	g367419.t1; g406403.t1; g51206.t1; g86215.t1
Allium fistulosum	AfisC1G05011; AfisC1G05013; AfisC2G08616; AfisC5G05590; AfisC6G02662
Allium sativum	Asa6G05504.1; Asa6G06539.1; Asa6G06540.1; Asa7G03986.1; Asa8G04069.1
Arabidopsis thaliana	AT1G16760.1; AT1G78940.1; AT1G78940.2; AT4G31230.1
Oryza sativa	LOC_Os02g54590.1; LOC_Os06g09230.2

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00582.23	Usp	Domain	6	117	30.3	4.6e-07
PF07714.14	Pkinase_Tyr	Domain	414	669	141.4	2.8e-41

Gene Ontology

Accession	Ontology	Name
GO:0004672	F	protein kinase activity
GO:0004713	F	protein tyrosine kinase activity
GO:0005524	F	ATP binding
GO:0006468	P	protein phosphorylation
GO:0006950	P	response to stress

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K17609	NXN; nucleoredoxin	EC:1.8.1.8	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network