result

Gene information

Detail information of Asa6G06638

Location

Gene	Chr	Start	End	Strand
Asa6G06638	chr6	1837940067	1837943599	-

Sequences

CDS

Protein

Gene

>Asa6G06638.1
ATGAGCATTGAACTTTGCACCAACGTAGATTCAGGGAAGCTTACATTTTTCAATTTCGACGAAGAGGGCAAAACCAGAAAGAGAGTTCACAAGATTAAATATCTTGGTTATACAATGCACTATAAATTTTCTAACATGGTTAATGGACTGGTTTGTGCTTATGGAAACAAAGCCACCGTTATATTCTACTTAATCAATCTTACCACGCTGAAAACATTGAAGTACTTGAAAAGAAGGTTAGAAGGCACTTCATACGACAACATCAGTTTAGGATTCGATCCATCCACAGGCTTATACAAATTCATCAGAATctattcttgcttcatgagttTTTCCTACCAGTGTGAGATTCTTGAAACTGGTGTTCTGTACAAAGGCGATTGGAAAATCATCGGAAAAATTCCTTATAAGGTTAATCTCGATAACCCAGTTTATTTGAATGGTGCAATCTACTGGGCAAGGAAATTTGAGCCATACAGAAAAGGTGAGCCGCATGCTTTTGATTTTCTTAAACTTGATATGAAGGAAGATAAATTTAAAAGGGCAGCTCCGAATCTTAAGGATGAATTTTACAACTGCGATCATACAGTTAGCAAAGCATGTGATTATTTCACTTTGGCTGAAGAGAACGGTAAGCTATATGTGCTTCATTATTGCATAAAGAGGCAGTATTTGGATGGATGGAGATTGAATGAAAGAAAAAAACACAGTGTTTGGAATGTTGTATGTCGTGTAAATTTTGCACCGATGCTTGGCAATGAACCACGCTGTTTGATGGGTGAATATCAACTTCCATATGTGGTTGGGATTACAGATGGTAAGGTCTTGATACGAAGCAGGTGTCATAATGAAGGGGTTTATATTTACGATTTGCTTCGAAAGAAACTTAGTAAACATTGGGATACTGATTGCGGTAGCTTTGTCTCTGACAATGAACAGAGACGAATGCTTTTCTACTGTCTGGAGTAATCAATAATGTATTTGATGCAACATGTTAGTTACGCATCTTACTATATGCAGATCTCTGTACAGTTTGCATTTTGTTGTTTGCAGTTGATGCCGAAGATTGTGCAGTTTTCTGATACTTTTTTGGGGATAATACAGTTAGAATATTTGGGTCTTTAGTAGTTGTGCTTTGTTAGTCGATGATTTGTATGACTTTTTGGTGTGTGCATATAGTAGCTGACTCTGTTGGCAGTAAATAATGTATATCTGCCTCTTTTGTTCCGCTCTTAAACAATGGTCTTTGTGCTGTAAAACTGAATGAAATGTATAACTTGGTTAGTGCTAGTTGTTTGCTGTTTGGCCTGCCTTGCTCTTTTTCAGGCAGTGTCCTtggtttttcttctctttttccatctttttaattttatttcagttttcaatTGCAATATATGTGGTTCTGAAGTTGATAGTTCAAGCTAGATGAGTTTTGTGTCATGTCAGCTAGTTGTTTgcagtcgaccgttttatggctgtggaccggaggacctcggtccataatCTATAttactctgcactctttcccggtcggagcctggaccgtttgggttttttctgtgacttttcaatacctcaaatatacagatttcagcaacgatgatatgatattgttttgtgcattcgtgttatattttgaggatagattttaacatatttctaacacgagtCAATGTAAAAAccttatttctatgaaatgatcttcattgcacctttatatgttggcatcgatcaaaattttGTTCTTAACAGAGCTCAGTCGAAAATTTCATGATATACCCATTTTTTACCCGTAAACattacagtaaatttctaaaataacAAGATATGCAATATTCTTTGTTAGATGGCTAATCAGCCTAGCATGTCAAGAAGAGCATAACACATTGAAAAGCTTTGAAAATAGATGTCGTTCATAACATGCATTGTTAACACAACTAAAAGAATGCCAACGTTATTCTCACTGGAGTATTGCATGGTTTTGTTcaataaaatttcatttgattGCTTATCATAGTTTCTAGTATTTTAATTGCAAGTGTTCTTGGTCTGTTTATGCTTACTCTTTGCATACGCCTCACCTATTTGACTCTAATGGTTATCTTTACATGATTAAATCAACCTAATTGACTGCGTTTATGCTTGAAGTCATCATGAGTTATCATTGTTTACTTACACTTCAATTATGTAGGTGGGCAATGGAACCATCCCGCAAGTTGAGCAGAGAAATCCCTACACAAGAGGTTTATTCATTGTAATTTGCTTATATATTACCTCATATCCAGATTTATTGTTTCCTTCAATATAATTTTCAATTGGGATTTTCACTTTTTCATGTCTCTGTTGTTAGTCTGATGATTTATGCTTTTGAGGGAGAAAAAAGTTATAGATGTTAAAATTTTGACATTTATATGCAGATGTACTTTCCCATTGATGTAATGGCAAACATATTGAATTGGCTTCCATCCACTTCCATCTCAAGATTTCAAACTGTTTCCAAGTATTGGTACCGCATTATCCATGTTTATGTTATTCTGAATCCACGATCCAAAAGTTCTTTGACGAACATTGAACTTTTCACTAATGTAGATTCAGGGAAGCTTATATTTGTTAGTTTCGACGAAGAGGGCAAAACCAAAAAGAGCGTTCATAAGATTAATCTTGGATGCACAATGCACTATAACTTTTTTAACATGGTTAACGGACTTGTTTGTGCTTATGGAAACGAAGCCACCATTACATTCTACTTAATCAATCTTACAACACTAAAAAAATTGGAAGTACTTGAAAAGAAGGTTACTTTACCTGAATATGACAGTATCAGTTTAGGATTCGATCCACCGACATGCATATACAAATTCATCAGAATATATTCTCGCTTCTTCGGTGATTCCTGTCAATGTGAGATTCTTGAAACTGGTCTTTTGTTCAATGGTGATTGGAAAATCATCGGAAAATTTCCTTATGAGGTTAATCTTAATAACCCGGTTTTCCTAAATAGAGCCATCTACTGGGCAAGGGAATCGGACGGTTTGCGATGGAAATGTAAGCCAGATGCTTTAGATCTTCTTAAACTTGACATGAAGGAAGAAAAATTTATAATGGTGGCTCCATTTCTTGATAACAAATTTGACGGCTGCAATCATAAACTTTGCCAAGCATGCAGTCGTGATACTTTGACAGTAGAAAAGGGTAAACTTTATGTATTGCATTATTGCTGCGAAAGGCGGTATTTGGATGGATGGAAATTGGATGAATGCAAAAGACACATTGTTTGGAATGTTGAATGTCATATAAATTTTGCATCGATGGTTGGCAATGAACCACACTGTGTGCTAAATTACTATGAATCTCCATGTGTGGTTGGGATTGCAGATGGTAAGGTCTTGATGCGAAAATTGTATGGGGAAGGGGTTTATTTCTACGACTTGCTTCGTAAGAAACTTAGTaacatttgggatattggttgcAGCAGTTTTGTCTCAAGAAGAAGGTTGCTTTTCTACTCTTGGAGTAATCAACCAAGCATTTGA

Functional annotation

Database	accession number	e-value	annotation
nr	KAE8667800.1	4.0e-04	Detected protein of unknown function
trEMBL	A0A6A2XDU4	2.9e-04	F-box domain-containing protein

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
-	-	-	-	-	-

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
-	-	-	-	-	-	-	-	-	-	-	-

Ortholog group

Species	Genes
Allium cepa	g221943.t1; g28300.t1; g305880.t1; g310930.t1; g339215.t1; g42107.t1; g421663.t1; g447305.t1; g467029.t1; g8069.t1; g8075.t1; g89566.t1
Allium fistulosum	AfisC2G05979; AfisC4G06983; AfisC5G00048; AfisC5G00854; AfisC5G06479; AfisC5G06481; AfisC5G06485; AfisC5G06486; AfisC5G06491; AfisC5G06495; AfisC5G06497; AfisC5G06503; AfisC5G06511; AfisC5G06512; AfisC7G00910; AfisC7G00918
Allium sativum	Asa0G00181.1; Asa0G01752.1; Asa4G00028.1; Asa4G04134.1; Asa4G04984.1; Asa4G04987.1; Asa4G04990.1; Asa4G05007.1; Asa6G06258.1; Asa6G06296.1; Asa6G06371.1; Asa6G06638.1; Asa7G04096.1; Asa7G04097.1; Asa7G04275.1; Asa7G04276.1; Asa7G04277.1; Asa7G04278.1; Asa7G04279.1
Arabidopsis thaliana	AT3G25550.1
Oryza sativa

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00646.30	F-box	Domain	301	331	19.6	0.00054

Gene Ontology

Accession	Ontology	Name
GO:0005515	F	protein binding

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network